RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 ZNF616Q08AN1 781 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 AWAT2Q6E213 333 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 JAGN1Q8N5M9 183 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 OR52L2PQ8NGH6 319 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 OR1N2Q8NGR9 330 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 DERL3Q96Q80 235 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 ANKRD60Q9BZ19 345 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 SELENOIQ9C0D9 397 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 CKLFQ9UBR5 152 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 VSIG4Q9Y279 399 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 FBXO7Q9Y3I1 522 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 WSB1Q9Y6I7 421 aa10.16□□□□□ -0.78
MRPL55-228ENST00000476267 STAB2Q8WWQ8 2551 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 SAA2-SAA4A0A096LPE2 208 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 TRAV41A0A0B4J266 112 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 A0A1W2PPK0 400 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 NBR2O15453 112 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 YPEL1O60688 119 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 PDCD6O75340 191 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 SAA2P0DJI9 122 aaPredicted RBP10.15□□□□□ -0.78
MRPL55-228ENST00000476267 MYL12AP19105 171 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 BLVRBP30043 206 aaPredicted RBP10.15□□□□□ -0.78
MRPL55-228ENST00000476267 PPP1CCP36873 323 aaKnown RBP10.15□□□□□ -0.78
MRPL55-228ENST00000476267 RAB9AP51151 201 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 HMGN3Q15651 99 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 C5orf64Q2M2E5 130 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 TMEM80Q96HE8 168 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 YPEL2Q96QA6 119 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 ZNF251Q9BRH9 671 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 IFI27L2Q9H2X8 130 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 SMAD5-AS1Q9Y6J3 95 aa10.15□□□□□ -0.78
MRPL55-228ENST00000476267 UBE2QL1A1L167 161 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 MAS1P04201 325 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 CD1AP06126 327 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 OR3A3P47888 321 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 LAIR2Q6ISS4 152 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 FAM71F2Q6NXP2 309 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 ZNF429Q86V71 674 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 SBSPONQ8IVN8 264 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 C10orf67Q8IYJ2 551 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 ZNF555Q8NEP9 628 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 DCUN1D4Q92564 292 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 GGHQ92820 318 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 DLX4Q92988 240 aaPredicted RBP10.14□□□□□ -0.79
MRPL55-228ENST00000476267 OR5B12Q96R08 314 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 ALX4Q9H161 411 aaPredicted RBP10.14□□□□□ -0.79
MRPL55-228ENST00000476267 ISYNA1Q9NPH2 558 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 PARP11Q9NR21 331 aa10.14□□□□□ -0.79
MRPL55-228ENST00000476267 OVOL1O14753 267 aa10.13□□□□□ -0.79
MRPL55-228ENST00000476267 CRTAPO75718 401 aaPredicted RBP10.13□□□□□ -0.79
MRPL55-228ENST00000476267 EGR2P11161 476 aaPredicted RBP10.13□□□□□ -0.79
MRPL55-228ENST00000476267 CAPGP40121 348 aa10.13□□□□□ -0.79
MRPL55-228ENST00000476267 LRRC36Q1X8D7 754 aa10.13□□□□□ -0.79
MRPL55-228ENST00000476267 CASC10Q5T4H9 136 aa10.13□□□□□ -0.79
MRPL55-228ENST00000476267 LIN54Q6MZP7 749 aa10.13□□□□□ -0.79
MRPL55-228ENST00000476267 TMEM65Q6PI78 240 aa10.13□□□□□ -0.79
MRPL55-228ENST00000476267 NKAIN3Q8N8D7 197 aa10.13□□□□□ -0.79
MRPL55-228ENST00000476267 SULT4A1Q9BR01 284 aa10.13□□□□□ -0.79
MRPL55-228ENST00000476267 UQCC2Q9BRT2 126 aa10.13□□□□□ -0.79
MRPL55-228ENST00000476267 TOLLIPQ9H0E2 274 aa10.13□□□□□ -0.79
MRPL55-228ENST00000476267 HYDINQ4G0P3 5121 aa10.12□□□□□ -0.79
MRPL55-228ENST00000476267 SLURP1P55000 103 aa10.12□□□□□ -0.79
MRPL55-228ENST00000476267 TAS2R43P59537 309 aa10.12□□□□□ -0.79
MRPL55-228ENST00000476267 ST3GAL4Q11206 333 aa10.12□□□□□ -0.79
MRPL55-228ENST00000476267 ZNF880Q6PDB4 577 aa10.12□□□□□ -0.79
MRPL55-228ENST00000476267 MUC7Q8TAX7 377 aa10.12□□□□□ -0.79
MRPL55-228ENST00000476267 FAM46BQ96A09 425 aa10.12□□□□□ -0.79
MRPL55-228ENST00000476267 RCHY1Q96PM5 261 aa10.12□□□□□ -0.79
MRPL55-228ENST00000476267 KCNIP1Q9NZI2 227 aa10.12□□□□□ -0.79
MRPL55-228ENST00000476267 GHRLQ9UBU3 117 aa10.12□□□□□ -0.79
MRPL55-228ENST00000476267 IGHV4OR15-8A0A075B7B6 117 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 A0A087WW49 117 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 PNMA8CA0A1B0GUJ8 204 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 EFCAB10A6NFE3 127 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 FCN1O00602 326 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 RGS11O94810 467 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 LY86O95711 162 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 BAG2O95816 211 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 NAPSAO96009 420 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 LGALS1P09382 135 aaKnown RBP10.11□□□□□ -0.79
MRPL55-228ENST00000476267 FRMD6-AS1P0C7T7 363 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 CT45A6P0DMU7 189 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 CT45A5P0DMU8 189 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 CT45A7P0DMV0 189 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 CD37P11049 281 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 SPNP16150 400 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 CELP19835 753 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 FAM27D1Q5T7N8 215 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 ZNF660Q6AZW8 331 aaPredicted RBP10.11□□□□□ -0.79
MRPL55-228ENST00000476267 ACSM6Q6P461 480 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 CD200R1LQ6Q8B3 271 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 FAM131AQ6UXB0 335 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 SVOPQ8N4V2 548 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 OR2AK2Q8NG84 335 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 CASTOR1Q8WTX7 329 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 GALMQ96C23 342 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 AGMATQ9BSE5 352 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 CST11Q9H112 138 aa10.11□□□□□ -0.79
MRPL55-228ENST00000476267 CHCHD3Q9NX63 227 aaKnown RBP10.11□□□□□ -0.79
MRPL55-228ENST00000476267 CNOT2Q9NZN8 540 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms