RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	RAB22A	Q9UL26	194 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	KCNK7	Q9Y2U2	307 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	SMIM30	A4D0T7	59 aa		13.14	□□□□□ -0.31
VPS8-222	ENST00000475580	ZNF736	B4DX44	427 aa	Predicted RBP	13.14	□□□□□ -0.31
VPS8-222	ENST00000475580	LANCL1	O43813	399 aa		13.14	□□□□□ -0.31
VPS8-222	ENST00000475580	CSF1	P09603	554 aa		13.14	□□□□□ -0.31
VPS8-222	ENST00000475580	LYG1	Q8N1E2	194 aa		13.14	□□□□□ -0.31
VPS8-222	ENST00000475580	SETD6	Q8TBK2	473 aa		13.14	□□□□□ -0.31
VPS8-222	ENST00000475580	PARP12	Q9H0J9	701 aa	Known RBP	13.14	□□□□□ -0.31
VPS8-222	ENST00000475580	OR51E2	Q9H255	320 aa		13.14	□□□□□ -0.31
VPS8-222	ENST00000475580	FGF16	O43320	207 aa		13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	TXNL1	O43396	289 aa		13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	SLC2A2	P11168	524 aa	Predicted RBP	13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	RAB6A	P20340	208 aa		13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	CD1B	P29016	333 aa		13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	RANBP1	P43487	201 aa		13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	TGIF2LX	Q8IUE1	241 aa		13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	CITED2	Q99967	270 aa	Predicted RBP	13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	IFI27L2	Q9H2X8	130 aa		13.13	□□□□□ -0.31
VPS8-222	ENST00000475580		Q9N2K0	584 aa		13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	C12orf4	Q9NQ89	552 aa		13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	ABRACL	Q9P1F3	81 aa		13.13	□□□□□ -0.31
VPS8-222	ENST00000475580	MEGF8	Q7Z7M0	2845 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	RAB27B	O00194	218 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	PEX14	O75381	377 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	HLA-DRB3	P79483	266 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	NEDD8	Q15843	81 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	TCTEX1D4	Q5JR98	221 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	C9orf152	Q5JTZ5	239 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	C10orf99	Q6UWK7	81 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	OR5AU1	Q8NGC0	362 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	OR2T10	Q8NGZ9	312 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	IL1F10	Q8WWZ1	152 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	RNF167	Q9H6Y7	350 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	PLSCR3	Q9NRY6	295 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	OR1A1	Q9P1Q5	309 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	SSR3	Q9UNL2	185 aa		13.12	□□□□□ -0.31
VPS8-222	ENST00000475580	IGKV1-6	A0A0C4DH72	117 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	NOTO	A8MTQ0	251 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	MFNG	O00587	321 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	RGS11	O94810	467 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	MOS	P00540	346 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	SCT	P09683	121 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	OR3A3	P47888	321 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	CD83	Q01151	205 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	LSAMP	Q13449	338 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	ZNF833P	Q6ZTB9	187 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	NDUFA11	Q86Y39	141 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580		Q8N9W7	124 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	OR10R2	Q8NGX6	335 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	PTX4	Q96A99	478 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	RAB3C	Q96E17	227 aa		13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	CMSS1	Q9BQ75	279 aa	Known RBP	13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	MRPL20	Q9BYC9	149 aa	Known RBP	13.11	□□□□□ -0.31
VPS8-222	ENST00000475580	SAA2-SAA4	A0A096LPE2	208 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	ST8SIA5	O15466	376 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	CLEC2L	P0C7M8	214 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	SAA2	P0DJI9	122 aa	Predicted RBP	13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	GADD45A	P24522	165 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	NSUN5P1	Q3KNT7	163 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	TPRA1	Q86W33	373 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	OR2AK2	Q8NG84	335 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	NABP2	Q9BQ15	211 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	ZNF251	Q9BRH9	671 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	CHCHD6	Q9BRQ6	235 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	AGMAT	Q9BSE5	352 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	SLC23A1	Q9UHI7	598 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	MGAT4A	Q9UM21	535 aa		13.1	□□□□□ -0.31
VPS8-222	ENST00000475580	LINC01548	A6NM66	108 aa		13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	ITGB1BP1	O14713	200 aa		13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	IGHG2	P01859	326 aa		13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	HIST1H1D	P16402	221 aa	Known RBP	13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	GNB3	P16520	340 aa		13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	CD36	P16671	472 aa		13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	SDC2	P34741	201 aa		13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	KCTD7	Q96MP8	289 aa		13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	NOL4L	Q96MY1	436 aa	Predicted RBP	13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	S1PR3	Q99500	378 aa		13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	CENPO	Q9BU64	300 aa		13.09	□□□□□ -0.31
VPS8-222	ENST00000475580	TRDC	B7Z8K6	153 aa		13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	FCGR3A	P08637	254 aa		13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	CD3G	P09693	182 aa		13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	F2RL1	P55085	397 aa		13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	RPL39P5	Q59GN2	51 aa		13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	FAM71F2	Q6NXP2	309 aa		13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	SFXN4	Q6P4A7	337 aa		13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	FAM71E2	Q8N5Q1	922 aa		13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	ABCG5	Q9H222	651 aa		13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	LIN7C	Q9NUP9	197 aa	Known RBP	13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	DAPK2	Q9UIK4	370 aa		13.08	□□□□□ -0.32
VPS8-222	ENST00000475580	NOTCH1	P46531	2555 aa		13.07	□□□□□ -0.32
VPS8-222	ENST00000475580		A0A075B6Q4	140 aa		13.07	□□□□□ -0.32
VPS8-222	ENST00000475580	LOC100506127	A0A0U1RQW1	187 aa		13.07	□□□□□ -0.32
VPS8-222	ENST00000475580	METTL21EP	A6NDL7	271 aa		13.07	□□□□□ -0.32
VPS8-222	ENST00000475580	NCBP2L	A6PVI3	153 aa	Known RBP	13.07	□□□□□ -0.32
VPS8-222	ENST00000475580	OPN1MW	P04001	364 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms