RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 C16orf82Q7Z2V1 217 aa11.06□□□□□ -0.64
USF1-205ENST00000473969 TGIF2LXQ8IUE1 241 aa11.06□□□□□ -0.64
USF1-205ENST00000473969 OR5H6Q8NGV6 325 aa11.06□□□□□ -0.64
USF1-205ENST00000473969 OR2T6Q8NHC8 308 aa11.06□□□□□ -0.64
USF1-205ENST00000473969 CT45A3Q8NHU0 189 aa11.06□□□□□ -0.64
USF1-205ENST00000473969 EDARADDQ8WWZ3 215 aa11.06□□□□□ -0.64
USF1-205ENST00000473969 SLC25A46Q96AG3 418 aa11.06□□□□□ -0.64
USF1-205ENST00000473969 KCTD12Q96CX2 325 aaKnown RBP11.06□□□□□ -0.64
USF1-205ENST00000473969 S100A16Q96FQ6 103 aaKnown RBP11.06□□□□□ -0.64
USF1-205ENST00000473969 RANBP3Q9H6Z4 567 aaPredicted RBP11.06□□□□□ -0.64
USF1-205ENST00000473969 KCNK7Q9Y2U2 307 aa11.06□□□□□ -0.64
USF1-205ENST00000473969 RNF114Q9Y508 228 aa11.06□□□□□ -0.64
USF1-205ENST00000473969 TRAV18A0A075B6X5 111 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 TIMM23O14925 209 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 SLC31A2O15432 143 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 FABP7O15540 132 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 NOL3O60936 208 aaKnown RBP11.05□□□□□ -0.64
USF1-205ENST00000473969 TSPAN9O75954 239 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 TFAP2AP05549 437 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 FCGR3AP08637 254 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 REG1BP48304 166 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 ALDH3B2P48448 385 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 ZNF134P52741 427 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 RELBQ01201 579 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 ZNF816Q0VGE8 651 aaPredicted RBP11.05□□□□□ -0.64
USF1-205ENST00000473969 PNLIPRP3Q17RR3 467 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 HACD4Q5VWC8 232 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 CCBE1Q6UXH8 406 aaPredicted RBP11.05□□□□□ -0.64
USF1-205ENST00000473969 C5orf24Q7Z6I8 188 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 THNSL2Q86YJ6 484 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 DRAM1Q8N682 238 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 ZNF439Q8NDP4 499 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 OR4A4PQ8NGN8 299 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 OR56B4Q8NH76 319 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 PRSS22Q9GZN4 317 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 C16orf95Q9H693 158 aa11.05□□□□□ -0.64
USF1-205ENST00000473969 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.05□□□□□ -0.64
USF1-205ENST00000473969 IGHV1-3A0A0C4DH29 117 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 BET1O15155 118 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 CHST1O43916 411 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 PEX14O75381 377 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 GABARAPO95166 117 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 SNRNP70P08621 437 aaKnown RBP11.04□□□□□ -0.64
USF1-205ENST00000473969 DTYMKP23919 212 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 RPL5P46777 297 aaKnown RBP11.04□□□□□ -0.64
USF1-205ENST00000473969 DIAPH2-AS1Q14236 149 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 SRSF7Q16629 238 aaKnown RBP eCLIP11.04□□□□□ -0.64
USF1-205ENST00000473969 ZNF260Q3ZCT1 412 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 UBE2NLQ5JXB2 153 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 MZT2AQ6P582 158 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 SHISA2Q6UWI4 295 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 SAMD12Q8N8I0 201 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 OR10J5Q8NHC4 309 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 LINC01006Q8NI28 216 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 RTN4IP1Q8WWV3 396 aaPredicted RBP11.04□□□□□ -0.64
USF1-205ENST00000473969 ACOT12Q8WYK0 555 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 AP3S1Q92572 193 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 S1PR3Q99500 378 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 GINS4Q9BRT9 223 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 SLC25A33Q9BSK2 321 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 ZNF747Q9BV97 191 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 ST6GALNAC5Q9BVH7 336 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 GHITMQ9H3K2 345 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 PIPOXQ9P0Z9 390 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 ZNF230Q9UIE0 474 aaPredicted RBP11.04□□□□□ -0.64
USF1-205ENST00000473969 SCOCQ9UIL1 159 aa11.04□□□□□ -0.64
USF1-205ENST00000473969 SMIM31A0A1B0GVY4 71 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 A0A1W2PPI3 338 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 TMEM235A6NFC5 223 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 M0QZK8 103 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 RAB29O14966 203 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 LANCL1O43813 399 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 OR2F2O95006 317 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 TMEM11P17152 192 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 SOX6P35712 828 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 C11orf88Q6PI97 169 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 CLVS1Q8IUQ0 354 aaPredicted RBP11.03□□□□□ -0.64
USF1-205ENST00000473969 IZUMO1Q8IYV9 350 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 SLC25A38Q96DW6 304 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 RBM14Q96PK6 669 aaKnown RBP11.03□□□□□ -0.64
USF1-205ENST00000473969 NAA50Q9GZZ1 169 aaKnown RBP11.03□□□□□ -0.64
USF1-205ENST00000473969 ABCG5Q9H222 651 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 DCSTAMPQ9H295 470 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 OR1A1Q9P1Q5 309 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 COMMD3Q9UBI1 195 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 ZNF221Q9UK13 617 aa11.03□□□□□ -0.64
USF1-205ENST00000473969 RBM7Q9Y580 266 aaKnown RBP11.03□□□□□ -0.64
USF1-205ENST00000473969 IGHV3-72A0A0B4J1Y9 119 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 FAM90A9PA6NNJ1 464 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 ITGB1BP1O14713 200 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 ST8SIA5O15466 376 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 DIRAS3O95661 229 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 IGKV1D-33P01593 117 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 IGKV1-33P01594 117 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 CTXN2P0C2S0 81 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 GSTT2P0CG29 244 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 GSTT2BP0CG30 244 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 CD1BP29016 333 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 ZNF137PP52743 207 aa11.02□□□□□ -0.65
USF1-205ENST00000473969 HNF4GQ14541 408 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms