RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 BANF1O75531 89 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 OR4A8P0C604 315 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 IGHV4-38-2P0DP08 117 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 IGKV1-13P0DP09 117 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 SELEP16581 610 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 DRD3P35462 400 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 VEGFCP49767 419 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 KLF3P57682 345 aaPredicted RBP4.75□□□□□ -1.65
RTF1-203ENST00000473214 LMO4P61968 165 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 EMX2Q04743 252 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 PRDX4Q13162 271 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 BATFQ16520 125 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 OR2B11Q5JQS5 317 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 MUC21Q5SSG8 566 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 FAM162BQ5T6X4 162 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 ALKAL1Q6UXT8 129 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 OOSP2Q86WS3 158 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 UMODL1-AS1Q8N2C9 162 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 ZNF114Q8NC26 417 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 BEST4Q8NFU0 473 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 OR52L1Q8NGH7 329 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 GNPDA2Q8TDQ7 276 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 C9orf85Q96MD7 179 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 OR4K3Q96R72 315 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 HSPB9Q9BQS6 159 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 PBDC1Q9BVG4 233 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 TBL1XR1Q9BZK7 514 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 SLIRPQ9GZT3 109 aaKnown RBP4.75□□□□□ -1.65
RTF1-203ENST00000473214 OR51I2Q9H344 312 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 MED29Q9NX70 200 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 SHPKQ9UHJ6 478 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 HSPB8Q9UJY1 196 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 PRNDQ9UKY0 176 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 HDGFL3Q9Y3E1 203 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 INSL5Q9Y5Q6 135 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 MICAL3Q7RTP6 2002 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 SPEGQ15772 3267 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 GPR179Q6PRD1 2367 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 ZFYVE26Q68DK2 2539 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 D6RAR5 112 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 NPIPB7O75200 414 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 GCM2O75603 506 aaPredicted RBP4.74□□□□□ -1.65
RTF1-203ENST00000473214 GADD45GO95257 159 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 PAK4O96013 591 aaPredicted RBP4.74□□□□□ -1.65
RTF1-203ENST00000473214 IGF2P01344 180 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 APOA2P02652 100 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 TSPAN19P0C672 248 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 OR5H8P0DN80 308 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 TCN2P20062 427 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 CTRLP40313 264 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 RPL35P42766 123 aaKnown RBP4.74□□□□□ -1.65
RTF1-203ENST00000473214 CSRP3P50461 194 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 HPCAP84074 193 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 LAMTOR4Q0VGL1 99 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 TNFAIP8L3Q5GJ75 292 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 KLF17Q5JT82 389 aaPredicted RBP4.74□□□□□ -1.65
RTF1-203ENST00000473214 LY6G5CQ5SRR4 150 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 SPATA31B1PQ5VZV4 182 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 PLET1Q6UQ28 207 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 GDPGP1Q6ZNW5 385 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 FOXL2NBQ6ZUU3 175 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 GOLT1AQ6ZVE7 132 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 OR13C4Q8NGS5 318 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 LINC00476Q8WZB0 136 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 FAM19A4Q96LR4 140 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 TMEM126AQ9H061 195 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 LYRM2Q9NU23 88 aaPredicted RBP4.74□□□□□ -1.65
RTF1-203ENST00000473214 UQCC1Q9NVA1 299 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 CALML5Q9NZT1 146 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 SSR3Q9UNL2 185 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 OTOGLQ3ZCN5 2332 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 FRYQ5TBA9 3013 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 KIAA1671Q9BY89 1806 aa4.74□□□□□ -1.65
RTF1-203ENST00000473214 PTPRJQ12913 1337 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 SAA2-SAA4A0A096LPE2 208 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 IGLV1-36A0A0B4J1U3 117 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 TRAV8-6A0A0B4J262 113 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 FAM236DA0A1B0GTK5 79 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 A0A1B0GV50 99 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 OR5H14A6NHG9 310 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 FOXI3A8MTJ6 420 aaPredicted RBP4.73□□□□□ -1.65
RTF1-203ENST00000473214 C12orf77C9JDV5 145 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 H7C417 338 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 K7ERU9 68 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 SLC17A2O00624 439 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 TNFRSF13BO14836 293 aaPredicted RBP4.73□□□□□ -1.65
RTF1-203ENST00000473214 SLC22A1O15245 554 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 RGS5O15539 181 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 CCNE2O96020 404 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 SNRPCP09234 159 aaKnown RBP4.73□□□□□ -1.65
RTF1-203ENST00000473214 METTL15P1P0C7V9 234 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 UBBP0CG47 229 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 FAM236CP0DP71 79 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 MARCKSL1P49006 195 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 KLK7P49862 253 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 EMP1P54849 157 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 H2BFSP57053 126 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 FOXI1Q12951 378 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 BAMBIQ13145 260 aa4.73□□□□□ -1.65
RTF1-203ENST00000473214 IHHQ14623 411 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms