RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 YTHDF1Q9BYJ9 559 aaKnown RBP12.39□□□□□ -0.43
MRPL55-226ENST00000473066 C12orf4Q9NQ89 552 aa12.39□□□□□ -0.43
MRPL55-226ENST00000473066 AK3Q9UIJ7 227 aa12.39□□□□□ -0.43
MRPL55-226ENST00000473066 HSF4Q9ULV5 492 aa12.39□□□□□ -0.43
MRPL55-226ENST00000473066 TSSC4Q9Y5U2 329 aaPredicted RBP12.39□□□□□ -0.43
MRPL55-226ENST00000473066 A0A0A6YYD4 124 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 TRDV1A0A1B0GX56 115 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 HSPA12AO43301 675 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 RAB3BP20337 219 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 GALP22466 123 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 GADD45AP24522 165 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 HLA-DRB3P79483 266 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 CD83Q01151 205 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 C1QL4Q86Z23 238 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 OR8H1Q8NGG4 311 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 CYYR1Q96J86 154 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 RASL11BQ9BPW5 248 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 CMSS1Q9BQ75 279 aaKnown RBP12.38□□□□□ -0.43
MRPL55-226ENST00000473066 LIN7CQ9NUP9 197 aaKnown RBP12.38□□□□□ -0.43
MRPL55-226ENST00000473066 RAB22AQ9UL26 194 aa12.38□□□□□ -0.43
MRPL55-226ENST00000473066 KCNAB3O43448 404 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 PF4P02776 101 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 ZNF134P52741 427 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 LSAMPQ13449 338 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 C2orf76Q3KRA6 126 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 LY6G6FQ5SQ64 297 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 UBE2UQ5VVX9 321 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 C22orf42Q6IC83 251 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 ZNF880Q6PDB4 577 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 CD200R1LQ6Q8B3 271 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 SPARTQ8N0X7 666 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 FAM89BQ8N5H3 189 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 ARHGAP5-AS1Q96IT6 56 aa12.37□□□□□ -0.43
MRPL55-226ENST00000473066 TRBV6-6A0A0A6YYG2 114 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 TMEM272A0A1B0GTI8 110 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 RRP9O43818 475 aaKnown RBP12.36□□□□□ -0.43
MRPL55-226ENST00000473066 IGHG2P01859 326 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 CD3GP09693 182 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 OR10A3P58181 314 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 Q8N6K4 173 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 EDARADDQ8WWZ3 215 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 S1PR3Q99500 378 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 HDHD3Q9BSH5 251 aaPredicted RBP12.36□□□□□ -0.43
MRPL55-226ENST00000473066 GON7Q9BXV9 100 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 PECRQ9BY49 303 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 PIPOXQ9P0Z9 390 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 SLC23A1Q9UHI7 598 aa12.36□□□□□ -0.43
MRPL55-226ENST00000473066 SAA2-SAA4A0A096LPE2 208 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 METTL21EPA6NDL7 271 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 IFITM5A6NNB3 132 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 ADARB2-AS1A8MUL3 147 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 AP4M1O00189 453 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 SAA2P0DJI9 122 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-226ENST00000473066 CD33P20138 364 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 MMDQ15546 238 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 PDLIM3Q53GG5 364 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-226ENST00000473066 FAM71F2Q6NXP2 309 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 ZNF773Q6PK81 442 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 C5orf24Q7Z6I8 188 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 COMMD1Q8N668 190 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 Q8N9W7 124 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 RAB3CQ96E17 227 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 MRPL20Q9BYC9 149 aaKnown RBP12.35□□□□□ -0.43
MRPL55-226ENST00000473066 ABCG5Q9H222 651 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 STUB1Q9UNE7 303 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 SSR3Q9UNL2 185 aa12.35□□□□□ -0.43
MRPL55-226ENST00000473066 RRP15Q9Y3B9 282 aaKnown RBP12.35□□□□□ -0.43
MRPL55-226ENST00000473066 NUDT19A8MXV4 375 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 ZNF736B4DX44 427 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-226ENST00000473066 RAB29O14966 203 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 LDLRAD4O15165 306 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 ST8SIA5O15466 376 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 RAB6AP20340 208 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 ZBTB25P24278 435 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 GPR12P47775 334 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 C10orf99Q6UWK7 81 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 ZNF833PQ6ZTB9 187 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 ZNF329Q86UD4 541 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 STPG2Q8N412 459 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 NOL4LQ96MY1 436 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-226ENST00000473066 NABP2Q9BQ15 211 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 ZNF251Q9BRH9 671 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 IFI27L2Q9H2X8 130 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 Q9N2K0 584 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 LINC00527Q9UJ94 153 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 NOTCH1P46531 2555 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 CMYA5Q8N3K9 4069 aa12.34□□□□□ -0.43
MRPL55-226ENST00000473066 VWFP04275 2813 aa12.33□□□□□ -0.43
MRPL55-226ENST00000473066 A0A075B6Q4 140 aa12.33□□□□□ -0.44
MRPL55-226ENST00000473066 FOXI3A8MTJ6 420 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-226ENST00000473066 FGF9P31371 208 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-226ENST00000473066 SOX6P35712 828 aa12.33□□□□□ -0.44
MRPL55-226ENST00000473066 OR3A3P47888 321 aa12.33□□□□□ -0.44
MRPL55-226ENST00000473066 TMEM50BP56557 158 aa12.33□□□□□ -0.44
MRPL55-226ENST00000473066 TCTEX1D4Q5JR98 221 aa12.33□□□□□ -0.44
MRPL55-226ENST00000473066 ODF3L1Q8IXM7 274 aa12.33□□□□□ -0.44
MRPL55-226ENST00000473066 OR10R2Q8NGX6 335 aa12.33□□□□□ -0.44
MRPL55-226ENST00000473066 PHF21AQ96BD5 680 aa12.33□□□□□ -0.44
MRPL55-226ENST00000473066 GHITMQ9H3K2 345 aa12.33□□□□□ -0.44
MRPL55-226ENST00000473066 TXNL4BQ9NX01 149 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms