RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ZNF134P52741 427 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 TAS2R20P59543 309 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 LSAMPQ13449 338 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 GNMTQ14749 295 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 SRSF7Q16629 238 aaKnown RBP eCLIP10.56□□□□□ -0.723e-11■■■■□ 20.4
TPM3-216ENST00000473036 HLA-DRB5Q30154 266 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 OR52W1Q6IF63 320 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 TRAT1Q6PIZ9 186 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 ZNF439Q8NDP4 499 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 OR10A7Q8NGE5 316 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 ZNF596Q8TC21 504 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 FCAMRQ8WWV6 532 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 DEDD2Q8WXF8 326 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 RBMXL1Q96E39 390 aaKnown RBP10.56□□□□□ -0.72
TPM3-216ENST00000473036 MALSU1Q96EH3 234 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 AUNIPQ9H7T9 357 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 TRAPPC2LQ9UL33 140 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 MRPS7Q9Y2R9 242 aaKnown RBP10.56□□□□□ -0.72
TPM3-216ENST00000473036 VWFP04275 2813 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 DNAH3Q8TD57 4116 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 TRBV6-6A0A0A6YYG2 114 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 VGLL3A8MV65 326 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 GABARAPH6UMI1 98 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 MFNGO00587 321 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 CHST1O43916 411 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 GPR137BO60478 399 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 GSTT2BP0CG30 244 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 GNB3P16520 340 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 HTR1DP28221 377 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 GNG10P50151 68 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 LGALS4P56470 323 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 GNG2P59768 71 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 ARFRP1Q13795 201 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 HMGN3Q15651 99 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 LY6EQ16553 131 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 LRRC75BQ2VPJ9 315 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 ZNF260Q3ZCT1 412 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 MINOS1Q5TGZ0 78 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 MOB1BQ7L9L4 216 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 ZNF554Q86TJ5 538 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 PRR18Q8N4B5 295 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 OR52L2PQ8NGH6 319 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 OR10V1Q8NGI7 309 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 OR9G1Q8NH87 305 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 SOSTQ9BQB4 213 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 MMP28Q9H239 520 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 C12orf4Q9NQ89 552 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 TAS2R8Q9NYW2 309 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 C1RLQ9NZP8 487 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 VPREB3Q9UKI3 123 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 MINOS1-NBL1R4GNA1 71 aa10.55□□□□□ -0.72
TPM3-216ENST00000473036 SDCBPO00560 298 aaPredicted RBP10.54□□□□□ -0.72
TPM3-216ENST00000473036 RBBP9O75884 186 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 LPLP06858 475 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 DTYMKP23919 212 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 CD24P25063 80 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 PPP5CP53041 499 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 AP3S2P59780 193 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 ACTBP60709 375 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 AANATQ16613 207 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 PYDC2Q56P42 97 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 TPTE2P1Q5T6R2 138 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 OR52M1Q8NGK5 317 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 CMSS1Q9BQ75 279 aaKnown RBP10.54□□□□□ -0.72
TPM3-216ENST00000473036 OCSTAMPQ9BR26 566 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 CCDC32Q9BV29 185 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 PARP12Q9H0J9 701 aaKnown RBP10.54□□□□□ -0.72
TPM3-216ENST00000473036 DPM3Q9P2X0 92 aa10.54□□□□□ -0.72
TPM3-216ENST00000473036 ZNF107Q9UII5 783 aaPredicted RBP10.54□□□□□ -0.72
TPM3-216ENST00000473036 IGKV1-6A0A0C4DH72 117 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 A6NDX4 124 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 GSTZ1O43708 216 aaPredicted RBP10.53□□□□□ -0.72
TPM3-216ENST00000473036 HLA-DQB1P01920 261 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 DEFA6Q01524 100 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 CT45A1Q5HYN5 189 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 C6orf183Q5T699 404 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 TREML4Q6UXN2 200 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 Q8N402 240 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 CT45A3Q8NHU0 189 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 ST6GALNAC6Q969X2 333 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 DPAGT1Q9H3H5 408 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 CHMP1AQ9HD42 196 aaPredicted RBP10.53□□□□□ -0.72
TPM3-216ENST00000473036 Q9N2K0 584 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 KCNIP1Q9NZI2 227 aa10.53□□□□□ -0.72
TPM3-216ENST00000473036 IGKV1D-8A0A087WSZ0 117 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 A0A1W2PPI3 338 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 LEUTXA8MZ59 168 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 TOR1AO14656 332 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 SPINT2O43291 252 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 SCTP09683 121 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 MDKP21741 143 aaPredicted RBP10.52□□□□□ -0.73
TPM3-216ENST00000473036 PPP1CCP36873 323 aaKnown RBP10.52□□□□□ -0.73
TPM3-216ENST00000473036 KIR2DS4P43632 304 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 INPP1P49441 399 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 DYNLT3P51808 116 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 KIR2DS1Q14954 304 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 HERPUD1Q15011 391 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 TMEM30BQ3MIR4 351 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 MORN2Q502X0 79 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms