RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 RCC1LQ96I51 464 aaKnown RBP12.06□□□□□ -0.48
COL1A1-203ENST00000471344 HDHD3Q9BSH5 251 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-203ENST00000471344 PARP12Q9H0J9 701 aaKnown RBP12.06□□□□□ -0.48
COL1A1-203ENST00000471344 WI2-2373I1.2A0A1W2PRP0 233 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 TMEM14DPA8MWL7 114 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 AP4M1O00189 453 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 SLC22A1O15245 554 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 LANCL1O43813 399 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 UBBP0CG47 229 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 HSMCR30P0CW71 290 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 HMGN3Q15651 99 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 GLT8D1Q68CQ7 371 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 PRSS48Q7RTY5 328 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 SVOPQ8N4V2 548 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 UFD1Q92890 307 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 NEDD4LQ96PU5 975 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 RASL11BQ9BPW5 248 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 TM2D1Q9BX74 207 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 KCNIP1Q9NZI2 227 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 JPT1Q9UK76 154 aa12.05□□□□□ -0.48
COL1A1-203ENST00000471344 SAA2-SAA4A0A096LPE2 208 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 SOCS1O15524 211 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 TXNL1O43396 289 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 SAA2P0DJI9 122 aaPredicted RBP12.04□□□□□ -0.48
COL1A1-203ENST00000471344 CD37P11049 281 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 SLC35B1P78383 322 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 CFHR3Q02985 330 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 ZNF554Q86TJ5 538 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 IL1F10Q8WWZ1 152 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 RAX2Q96IS3 184 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 P2RX4Q99571 388 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 NABP2Q9BQ15 211 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 LPAR5Q9H1C0 372 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 IFI27L2Q9H2X8 130 aa12.04□□□□□ -0.48
COL1A1-203ENST00000471344 ST8SIA5O15466 376 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 NAPSAO96009 420 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 BLVRBP30043 206 aaPredicted RBP12.03□□□□□ -0.48
COL1A1-203ENST00000471344 CLDN12P56749 244 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 HTD2P86397 168 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 PLA2G7Q13093 441 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 MMDQ15546 238 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 STEAP3Q658P3 488 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 ZNF833PQ6ZTB9 187 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 ZNF695Q8IW36 515 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 OR51D1Q8NGF3 324 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 OR6M1Q8NGM8 313 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 KCNG3Q8TAE7 436 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 SETD6Q8TBK2 473 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 CHMP1AQ9HD42 196 aaPredicted RBP12.03□□□□□ -0.48
COL1A1-203ENST00000471344 ACOT13Q9NPJ3 140 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 ZFP57Q9NU63 452 aa12.03□□□□□ -0.48
COL1A1-203ENST00000471344 AK6Q9Y3D8 172 aaKnown RBP12.03□□□□□ -0.48
COL1A1-203ENST00000471344 YPEL1O60688 119 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 BPNT1O95861 308 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 SNRPBP14678 240 aaKnown RBP12.02□□□□□ -0.49
COL1A1-203ENST00000471344 SOX6P35712 828 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 GABARAPL2P60520 117 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 ACTBP60709 375 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 TPBGQ13641 420 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 TBCEQ15813 527 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-203ENST00000471344 SSX1Q16384 188 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 PNLIPRP3Q17RR3 467 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 RPL39P5Q59GN2 51 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 ZNF880Q6PDB4 577 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 TEX38Q6PEX7 206 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 COMMD1Q8N668 190 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 OR8H1Q8NGG4 311 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 GALMQ96C23 342 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 YPEL2Q96QA6 119 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 ISYNA1Q9NPH2 558 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 OR1A1Q9P1Q5 309 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 ZNF107Q9UII5 783 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-203ENST00000471344 AK3Q9UIJ7 227 aa12.02□□□□□ -0.49
COL1A1-203ENST00000471344 FOXI3A8MTJ6 420 aaPredicted RBP12.01□□□□□ -0.49
COL1A1-203ENST00000471344 G3V318 75 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 SLC17A2O00624 439 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 MYCNOSP40205 109 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 RAB25P57735 213 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 FABP5Q01469 135 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 FOXE3Q13461 319 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 GLDNQ6ZMI3 551 aaPredicted RBP12.01□□□□□ -0.49
COL1A1-203ENST00000471344 SPARTQ8N0X7 666 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 RNF152Q8N8N0 203 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 OR2AK2Q8NG84 335 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 KCTD7Q96MP8 289 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 MGLLQ99685 303 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 ZNF251Q9BRH9 671 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 Q9H521 79 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 PLGRKTQ9HBL7 147 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 PLEKHJ1Q9NW61 149 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 WSB1Q9Y6I7 421 aa12.01□□□□□ -0.49
COL1A1-203ENST00000471344 CCL24O00175 119 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 DUS4LO95620 317 aaKnown RBP12□□□□□ -0.49
COL1A1-203ENST00000471344 IGHG4P01861 327 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 ARSBP15848 533 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 CPEP16870 476 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 VDAC1P21796 283 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 PSMA1P25786 263 aaKnown RBP12□□□□□ -0.49
COL1A1-203ENST00000471344 CALRP27797 417 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms