RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 GHSRQ92847 366 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 VSIG2Q96IQ7 327 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 SLC35G5Q96KT7 338 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 CAPZA3Q96KX2 299 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 HSPB9Q9BQS6 159 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 PBDC1Q9BVG4 233 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 SH3BGRL3Q9H299 93 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 ZDHHC11Q9H8X9 412 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 HES4Q9HCC6 221 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 ACER3Q9NUN7 267 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 CLCF1Q9UBD9 225 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 SSR3Q9UNL2 185 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 SLC25A15Q9Y619 301 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 KDM5BQ9UGL1 1544 aa3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 RIMS1Q86UR5 1692 aaKnown RBP3.32□□□□□ -1.88
PRPF40A-206ENST00000471167 ARAP1Q96P48 1450 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 PTPRKQ15262 1439 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 DHX57Q6P158 1386 aaKnown RBP3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 KIF15Q9NS87 1388 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 PTPRJQ12913 1337 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 SMIM26A0A096LP01 95 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 A0A0J9YXV3 536 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 PLAC8L1A1L4L8 177 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 TRAPPC13A5PLN9 417 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 PGPA6NDG6 321 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 ZNF850A8MQ14 1090 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 COPEO14579 308 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 ZNF207O43670 478 aaKnown RBP3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 GADD45GO95257 159 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 APOA2P02652 100 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 FGF6P10767 208 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 LAMP1P11279 417 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 PRTN3P24158 256 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 CDK2P24941 298 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 P2RX1P51575 399 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 NCBP2P52298 156 aaKnown RBP eCLIP3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 SLC18A1P54219 525 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 DAD1P61803 113 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 HLA-DRB3P79483 266 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 PNOCQ13519 176 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 HERPUD1Q15011 391 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 JOSD1Q15040 202 aaPredicted RBP3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 MESTQ5EB52 335 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 C1orf194Q5T5A4 169 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 ZFAND6Q6FIF0 208 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 CXCL17Q6UXB2 119 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 FA2HQ7L5A8 372 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 TMEM179BQ7Z7N9 219 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 GALMQ96C23 342 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 ROPN1LQ96C74 230 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 REEP6Q96HR9 211 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 CNBD2Q96M20 576 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 CCDC115Q96NT0 180 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 RNF157Q96PX1 679 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 KLF6Q99612 283 aaPredicted RBP3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 PRSS27Q9BQR3 290 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 MND1Q9BWT6 205 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 HMG20AQ9NP66 347 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 UBQLN4Q9NRR5 601 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 SPANXCQ9NY87 97 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 COA4Q9NYJ1 87 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 HES2Q9Y543 173 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 RBM7Q9Y580 266 aaKnown RBP3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 MYH3P11055 1940 aa3.31□□□□□ -1.88
PRPF40A-206ENST00000471167 CD109Q6YHK3 1445 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 MIA2Q96PC5 1412 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 A0A087WX48 190 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 IGKV6D-21A0A0A0MT36 114 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 CIB4A0PJX0 185 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 C9orf170A2RU37 121 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 H7C1C5 153 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 PANO1I0J062 215 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 PSPHP1O15172 72 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 CA2P00918 260 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 TRBV12-3P01733 135 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 CTLA4P16410 223 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 ZNF25P17030 456 aaPredicted RBP3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 SPI1P17947 270 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 RAB3AP20336 220 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 SLC25A1P53007 311 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 EMP1P54849 157 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 PIGPP57054 158 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 NCALDP61601 193 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 LCN6P62502 163 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 RPS24P62847 133 aaKnown RBP3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 IL15RAQ13261 267 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 KIAA0087Q14695 138 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 PAFAH1B3Q15102 231 aaKnown RBP3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 RGNQ15493 299 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 Q499Y3 187 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 C6orf99Q4VX62 202 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 LINC00173Q6ZV60 143 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 C20orf196Q8IYI0 205 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 DEFB125Q8N687 156 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 OR4S2Q8NH73 311 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 OR10G6Q8NH81 332 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 ZNF675Q8TD23 568 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 MBD3L1Q8WWY6 194 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 APOBEC3DQ96AK3 386 aaPredicted RBP3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 TMEM126AQ9H061 195 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms