RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 GALMQ96C23 342 aa11.13□□□□□ -0.63
COMMD3-208ENST00000470045 R3HDM4Q96D70 268 aa11.13□□□□□ -0.63
COMMD3-208ENST00000470045 YPEL2Q96QA6 119 aa11.13□□□□□ -0.63
COMMD3-208ENST00000470045 URM1Q9BTM9 101 aaKnown RBP11.13□□□□□ -0.63
COMMD3-208ENST00000470045 ABHD14AQ9BUJ0 271 aa11.13□□□□□ -0.63
COMMD3-208ENST00000470045 PLSCR3Q9NRY6 295 aa11.13□□□□□ -0.63
COMMD3-208ENST00000470045 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
COMMD3-208ENST00000470045 TRAV1-2A0A0B4J238 106 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 SHISA3A0PJX4 238 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 ZNF736B4DX44 427 aaPredicted RBP11.12□□□□□ -0.63
COMMD3-208ENST00000470045 G3V4G9 280 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 SOCS1O15524 211 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 MOSP00540 346 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 GALP22466 123 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 LSAMPQ13449 338 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 C1QL4Q86Z23 238 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 Q8N9W7 124 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 OR51D1Q8NGF3 324 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 OR8H1Q8NGG4 311 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 FAM3DQ96BQ1 224 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 RIMS4Q9H426 269 aaPredicted RBP11.12□□□□□ -0.63
COMMD3-208ENST00000470045 LIN7CQ9NUP9 197 aaKnown RBP11.12□□□□□ -0.63
COMMD3-208ENST00000470045 PLEKHJ1Q9NW61 149 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 TSSC4Q9Y5U2 329 aaPredicted RBP11.12□□□□□ -0.63
COMMD3-208ENST00000470045 V9GY05 133 aa11.12□□□□□ -0.63
COMMD3-208ENST00000470045 TRDV1A0A1B0GX56 115 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 PSMB11A5LHX3 300 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 DENRO43583 198 aaKnown RBP11.11□□□□□ -0.63
COMMD3-208ENST00000470045 RGS11O94810 467 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 RANBP1P43487 201 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 PSMD7P51665 324 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 TMEM50BP56557 158 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 CLDN12P56749 244 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 UBE2UQ5VVX9 321 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 ZNF833PQ6ZTB9 187 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 FAM71E2Q8N5Q1 922 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 CHPT1Q8WUD6 406 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 ABCG5Q9H222 651 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 IFI27L2Q9H2X8 130 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 ABRACLQ9P1F3 81 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 AK3Q9UIJ7 227 aa11.11□□□□□ -0.63
COMMD3-208ENST00000470045 TGP01266 2768 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 A0A1W2PRX2 142 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 TCRBV4S1A1TA0A5B7 111 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 GPR12P47775 334 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 C2orf76Q3KRA6 126 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 FAM71F2Q6NXP2 309 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 SLC35E3Q7Z769 313 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 WFDC9Q8NEX5 89 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 NOL4LQ96MY1 436 aaPredicted RBP11.1□□□□□ -0.63
COMMD3-208ENST00000470045 S1PR3Q99500 378 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 NABP2Q9BQ15 211 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 HDHD3Q9BSH5 251 aaPredicted RBP11.1□□□□□ -0.63
COMMD3-208ENST00000470045 C12orf4Q9NQ89 552 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 STEAP1Q9UHE8 339 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 NOTCH3Q9UM47 2321 aa11.1□□□□□ -0.63
COMMD3-208ENST00000470045 PRKDCP78527 4128 aaKnown RBP11.1□□□□□ -0.63
COMMD3-208ENST00000470045 SAA2-SAA4A0A096LPE2 208 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 TMEM272A0A1B0GTI8 110 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 NCBP2LA6PVI3 153 aaKnown RBP11.09□□□□□ -0.63
COMMD3-208ENST00000470045 SERPINE3A8MV23 424 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 ITGB1BP1O14713 200 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 PDCD5O14737 125 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 SAA2P0DJI9 122 aaPredicted RBP11.09□□□□□ -0.63
COMMD3-208ENST00000470045 VEGFCP49767 419 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 OR10A3P58181 314 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 HLA-DRB3P79483 266 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 PLA2G7Q13093 441 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 PLAC9Q5JTB6 97 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 HES5Q5TA89 166 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 ZNF329Q86UD4 541 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 FOXRED2Q8IWF2 684 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 SPARTQ8N0X7 666 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 STPG2Q8N412 459 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 OR2AK2Q8NG84 335 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 OR56B1Q8NGI3 324 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 IL1F10Q8WWZ1 152 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 RBMXL1Q96E39 390 aaKnown RBP11.09□□□□□ -0.63
COMMD3-208ENST00000470045 ARHGAP5-AS1Q96IT6 56 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 ZNF251Q9BRH9 671 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 PECRQ9BY49 303 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 MRPL20Q9BYC9 149 aaKnown RBP11.09□□□□□ -0.63
COMMD3-208ENST00000470045 YTHDF1Q9BYJ9 559 aaKnown RBP11.09□□□□□ -0.63
COMMD3-208ENST00000470045 Q9H521 79 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 CHMP1AQ9HD42 196 aaPredicted RBP11.09□□□□□ -0.63
COMMD3-208ENST00000470045 MGAT4AQ9UM21 535 aa11.09□□□□□ -0.63
COMMD3-208ENST00000470045 LINC01548A6NM66 108 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 IFITM5A6NNB3 132 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 AP4M1O00189 453 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 PF4V1P10720 104 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 MYL9P24844 172 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 F2RL1P55085 397 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 NR2C2APQ86WQ0 139 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 COMMD1Q8N668 190 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 FCGR1BQ92637 280 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 PARP12Q9H0J9 701 aaKnown RBP11.08□□□□□ -0.64
COMMD3-208ENST00000470045 Q9N2K0 584 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 ZNF580Q9UK33 172 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 RAB22AQ9UL26 194 aa11.08□□□□□ -0.64
COMMD3-208ENST00000470045 RAB3BP20337 219 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms