RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TBC1D28Q2M2D7 210 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 SLC25A24Q6NUK1 477 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 TMEM14EPQ6UXP3 125 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 SSX7Q7RTT5 188 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 TOLLIPQ9H0E2 274 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 ZNF665Q9H7R5 613 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 GNG13Q9P2W3 67 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 TRAPPC2LQ9UL33 140 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 SIRPB1O00241 398 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 S100PP25815 95 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 CEBPGP53567 150 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 ZNF766Q5HY98 468 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 SPATA46Q5T0L3 261 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 NCMAPQ5T1S8 102 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 P4HA3Q7Z4N8 544 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 ZNF610Q8N9Z0 462 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 ZBTB34Q8NCN2 500 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 PINX1Q96BK5 328 aaKnown RBP11.51□□□□□ -0.57
BRCA1-209ENST00000470026 OR51B6Q9H340 312 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 C12orf49Q9H741 205 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 HES4Q9HCC6 221 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 TIMM9Q9Y5J7 89 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 DNAJC13O75165 2243 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 IGHV2-70P01814 119 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 GABRA6Q16445 453 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 LPAL2Q16609 132 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 TMEM41BQ5BJD5 291 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 MYPOPQ86VE0 399 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-209ENST00000470026 OR4C12Q96R67 309 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 DOK5Q9P104 306 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 MIOXQ9UGB7 285 aa11.51□□□□□ -0.57
BRCA1-209ENST00000470026 TGIF2-C20orf24A0A0A6YYL0 155 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 RNF212BA8MTL3 300 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 IQCF6A8MYZ5 107 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 SH2D1BO14796 132 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 CYB5R3P00387 301 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-209ENST00000470026 RAC2P15153 192 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 CEACAM6P40199 344 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 MPLP40238 635 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 PPP1CBP62140 327 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 MSMO1Q15800 293 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 TMEM164Q5U3C3 297 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 MRGPRGQ86SM5 289 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 FGFRL1Q8N441 504 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 SDF2L1Q9HCN8 221 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 VAX2Q9UIW0 290 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 TNRC18O15417 2968 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-209ENST00000470026 TMEM210A6NLX4 147 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 NDUFS6O75380 124 aaKnown RBP11.5□□□□□ -0.57
BRCA1-209ENST00000470026 RAB11AP62491 216 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 ZNF645Q8N7E2 425 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 TAF15Q92804 592 aaKnown RBP eCLIP11.5□□□□□ -0.576e-6■□□□□ 11.2
BRCA1-209ENST00000470026 GUCD1Q96NT3 240 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 OR2J1Q9GZK6 312 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 SPRR3Q9UBC9 169 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 HSPB7Q9UBY9 170 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 KCNS2Q9ULS6 477 aa11.5□□□□□ -0.57
BRCA1-209ENST00000470026 MED13Q9UHV7 2174 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 ATXN7O15265 892 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-209ENST00000470026 TGOLN2O43493 480 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST1H2BKO60814 126 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 WDR1O75083 606 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 YIF1AO95070 293 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST1H2BJP06899 126 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 CELA3BP08861 270 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST1H2BOP23527 126 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST1H2BBP33778 126 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST1H2BDP58876 126 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST1H2BCP62807 126 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 ZNF674Q2M3X9 581 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-209ENST00000470026 LCN15Q6UWW0 184 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 EDARADDQ8WWZ3 215 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST1H2BHQ93079 126 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST1H2BNQ99877 126 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 HIST1H2BMQ99879 126 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 AGMATQ9BSE5 352 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 GGACTQ9BVM4 153 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 IL17BQ9UHF5 180 aa11.49□□□□□ -0.57
BRCA1-209ENST00000470026 RBM7Q9Y580 266 aaKnown RBP11.49□□□□□ -0.57
BRCA1-209ENST00000470026 ZFP92A6NM28 416 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 CDIPTO14735 213 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 PHOX2AO14813 284 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 NXPH2O95156 264 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 TNFRSF9Q07011 255 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 MRPL49Q13405 166 aaKnown RBP11.48□□□□□ -0.57
BRCA1-209ENST00000470026 SPANXN5Q5MJ07 72 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-209ENST00000470026 LILRB2Q8N423 598 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 PRR18Q8N4B5 295 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 C5orf30Q96GV9 206 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 FER1L6-AS2Q96M78 137 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 ZDHHC11Q9H8X9 412 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 URGCP-MRPS24S4R325 110 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 DOCK7Q96N67 2140 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 TRBV24-1A0A075B6N3 115 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 TRGV5A0A0B4J1U4 118 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 MAP1LC3B2A6NCE7 125 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 PMS2P5A8MQ11 134 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms