RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 Q8WTZ3 238 aa13.41□□□□□ -0.26
TSPAN4-211ENST00000468468 MPC1Q9Y5U8 109 aa13.41□□□□□ -0.26
TSPAN4-211ENST00000468468 TRAV39A0A0B4J263 110 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 RHBDL1O75783 438 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 CXCL1P09341 107 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 SLC25A6P12236 298 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 NDUFA6P56556 154 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 ZNF674Q2M3X9 581 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 RSG1Q9BU20 258 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 GNG13Q9P2W3 67 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 CACNG5Q9UF02 275 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 MED13Q9UHV7 2174 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 PCNX2A6NKB5 2137 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 DEGS1O15121 323 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 IAPPP10997 89 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 S100A2P29034 98 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 APLNRP35414 380 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 WNT5AP41221 380 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 OR1C1Q15619 314 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 ATP1A1-AS1Q5TC04 95 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 NUFIP2Q7Z417 695 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 SCGB1C1Q8TD33 95 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 ATG101Q9BSB4 218 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 CABLES2Q9BTV7 478 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 TTTY12Q9BZ98 90 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 HIPK2Q9H2X6 1198 aa13.4□□□□□ -0.26
TSPAN4-211ENST00000468468 PIGBOS1A0A0B4J2F0 54 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 LOC102723971A0A1B0GUV8 181 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 OR5B21A6NL26 309 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 IGKV1-39P01597 117 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 IGKV1D-39P04432 117 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 HIST1H1BP16401 226 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 HOXA5P20719 270 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 CA6P23280 308 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 USF2Q15853 346 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 C3AR1Q16581 482 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 OR2T2Q6IF00 324 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 PRR18Q8N4B5 295 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 PPP1R3CQ9UQK1 317 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 PCP4P48539 62 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 ERVFRD-1P60508 538 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 GFI1BQ5VTD9 330 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 SLC35E3Q7Z769 313 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 RPRMQ9NS64 109 aa13.39□□□□□ -0.27
TSPAN4-211ENST00000468468 TRAV1-1A0A0B4J248 108 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 SYNGR2O43760 224 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 MCEMP1Q8IX19 187 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 SIRT7Q9NRC8 400 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 GAR1Q9NY12 217 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 PSENENQ9NZ42 101 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 RBM7Q9Y580 266 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 ASPMQ8IZT6 3477 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 TGIF2-C20orf24A0A0A6YYL0 155 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 ZFP92A6NM28 416 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 METTL15P1P0C7V9 234 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 ZNF16P17020 682 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 GLIPR1P48060 266 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 PLGLB1Q02325 96 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 TRIP6Q15654 476 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 SPATA46Q5T0L3 261 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 OR51I2Q9H344 312 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 VSIRQ9H7M9 311 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 PRSS50Q9UI38 385 aa13.38□□□□□ -0.27
TSPAN4-211ENST00000468468 IGLV2-14P01704 120 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 CDX1P47902 265 aaPredicted RBP13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 RAB11AP62491 216 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 ARL16Q0P5N6 197 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 LCN15Q6UWW0 184 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 TMEM251Q8N6I4 163 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 UBALD1Q8TB05 177 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 LSM10Q969L4 123 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 PKIBQ9C010 78 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 ZNF407Q9C0G0 2248 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 CD200P41217 278 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 TESK1Q15569 626 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 ZNF787Q6DD87 383 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 Q6P435 159 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 ZNF610Q8N9Z0 462 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 C12orf49Q9H741 205 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 DOK5Q9P104 306 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 KCNS2Q9ULS6 477 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 LRP5LA4QPB2 252 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 SIRPB1O00241 398 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 IGKV1-5P01602 117 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 CLN3Q13286 438 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 SPNS3Q6ZMD2 512 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 ZNF525Q8N782 197 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 ZNF665Q9H7R5 613 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 ABI3Q9P2A4 366 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 TRAPPC2LQ9UL33 140 aa13.37□□□□□ -0.27
TSPAN4-211ENST00000468468 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-211ENST00000468468 J3QT63 122 aa13.36□□□□□ -0.27
TSPAN4-211ENST00000468468 CYB5BO43169 146 aa13.36□□□□□ -0.27
TSPAN4-211ENST00000468468 FGF8P55075 233 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-211ENST00000468468 OR10G4Q8NGN3 311 aa13.36□□□□□ -0.27
TSPAN4-211ENST00000468468 C2orf88Q9BSF0 95 aa13.36□□□□□ -0.27
TSPAN4-211ENST00000468468 NPIPB11E5RHQ5 1161 aa13.36□□□□□ -0.27
TSPAN4-211ENST00000468468 WNT2P09544 360 aa13.36□□□□□ -0.27
TSPAN4-211ENST00000468468 ZNF726P1Q15940 193 aa13.36□□□□□ -0.27
TSPAN4-211ENST00000468468 FAM90A2PQ658T7 463 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms