RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 TMEM138Q9NPI0 162 aa9.29□□□□□ -0.92
UBR4-211ENST00000467272 MRPS18AQ9NVS2 196 aaKnown RBP9.29□□□□□ -0.92
UBR4-211ENST00000467272 GAB2Q9UQC2 676 aa9.29□□□□□ -0.92
UBR4-211ENST00000467272 AP4S1Q9Y587 144 aa9.29□□□□□ -0.92
UBR4-211ENST00000467272 DNAH6Q9C0G6 4158 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 MAGEB3O15480 346 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 RGS11O94810 467 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 GLAP06280 429 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 GTF2F2P13984 249 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 ZNF93P35789 620 aaPredicted RBP9.28□□□□□ -0.92
UBR4-211ENST00000467272 OR3A3P47888 321 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 GTF2A1P52655 376 aaPredicted RBP9.28□□□□□ -0.92
UBR4-211ENST00000467272 ECSCRQ19T08 205 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 ATAD3CQ5T2N8 411 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 XAF1Q6GPH4 301 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 TRAT1Q6PIZ9 186 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 OR52L2PQ8NGH6 319 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 OR4K15Q8NH41 348 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 CENPNQ96H22 339 aaPredicted RBP9.28□□□□□ -0.92
UBR4-211ENST00000467272 IFI27L2Q9H2X8 130 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 TAF9BQ9HBM6 251 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 OR2S2Q9NQN1 319 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 SIGLEC8Q9NYZ4 499 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 CNOT2Q9NZN8 540 aaKnown RBP9.28□□□□□ -0.92
UBR4-211ENST00000467272 AASSQ9UDR5 926 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 JPT1Q9UK76 154 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 ING4Q9UNL4 249 aa9.28□□□□□ -0.92
UBR4-211ENST00000467272 SAA2-SAA4A0A096LPE2 208 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 FAM90A7PA6NKC0 464 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 FAM90A23PA8MXZ1 464 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 RRHO14718 337 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 YPEL1O60688 119 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 BRI3O95415 125 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 FADS2O95864 444 aaKnown RBP9.27□□□□□ -0.93
UBR4-211ENST00000467272 IGHV3-11P01762 117 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 LIMS3P0CW19 117 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 LIMS4P0CW20 117 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 SAA2P0DJI9 122 aaPredicted RBP9.27□□□□□ -0.93
UBR4-211ENST00000467272 SERPINA2P20848 420 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 PPP1CCP36873 323 aaKnown RBP9.27□□□□□ -0.93
UBR4-211ENST00000467272 SOX2P48431 317 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 SSBP2P81877 361 aaPredicted RBP9.27□□□□□ -0.93
UBR4-211ENST00000467272 DDI2Q5TDH0 399 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 FAM71F2Q6NXP2 309 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 IL17DQ8TAD2 202 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 MRPL30Q8TCC3 161 aaKnown RBP9.27□□□□□ -0.93
UBR4-211ENST00000467272 GPR148Q8TDV2 347 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 TSEN15Q8WW01 171 aaKnown RBP9.27□□□□□ -0.93
UBR4-211ENST00000467272 MRPS24Q96EL2 167 aaKnown RBP9.27□□□□□ -0.93
UBR4-211ENST00000467272 YPEL2Q96QA6 119 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 ELOVL1Q9BW60 279 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 SLA2Q9H6Q3 261 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 RAB9BQ9NP90 201 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 PAK1IP1Q9NWT1 392 aaPredicted RBP9.27□□□□□ -0.93
UBR4-211ENST00000467272 ETAA1Q9NY74 926 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 TRAPPC2LQ9UL33 140 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 ERGIC3Q9Y282 383 aa9.27□□□□□ -0.93
UBR4-211ENST00000467272 FAT2Q9NYQ8 4349 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 MCRIP1C9JLW8 97 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 CSTBP04080 98 aaKnown RBP9.26□□□□□ -0.93
UBR4-211ENST00000467272 IFNA6P05013 189 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 CT45A6P0DMU7 189 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 CT45A5P0DMU8 189 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 CT45A7P0DMV0 189 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 ARSBP15848 533 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 SLC22A6Q4U2R8 563 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 CCDC58Q4VC31 144 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 ACTBL2Q562R1 376 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 RAB12Q6IQ22 244 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 ZNF562Q6V9R5 426 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 STX19Q8N4C7 294 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 OR5AN1Q8NGI8 311 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 RHOXF1Q8NHV9 184 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 ORAI1Q96D31 301 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 MRPL48Q96GC5 212 aaKnown RBP9.26□□□□□ -0.93
UBR4-211ENST00000467272 RDH12Q96NR8 316 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 OR14A2Q96R54 314 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 MYCBPQ99417 103 aaPredicted RBP9.26□□□□□ -0.93
UBR4-211ENST00000467272 AGMATQ9BSE5 352 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 FBXL15Q9H469 300 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 RETNQ9HD89 108 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 IMPAD1Q9NX62 359 aa9.26□□□□□ -0.93
UBR4-211ENST00000467272 TRBV5-5A0A0J9YX44 114 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 H0YJW9 148 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 PROP1O75360 226 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 CSN3P07498 182 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 FCGR1AP12314 374 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 BDKRB2P30411 391 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 GBX2P52951 348 aaPredicted RBP9.25□□□□□ -0.93
UBR4-211ENST00000467272 RPS11P62280 158 aaKnown RBP eCLIP9.25□□□□□ -0.93
UBR4-211ENST00000467272 TMEM267Q0VDI3 215 aaPredicted RBP9.25□□□□□ -0.93
UBR4-211ENST00000467272 RPL22L1Q6P5R6 122 aaKnown RBP9.25□□□□□ -0.93
UBR4-211ENST00000467272 FAM131AQ6UXB0 335 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 PPP1R27Q86WC6 154 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 ANKRD13BQ86YJ7 626 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 PRR18Q8N4B5 295 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 LFNGQ8NES3 379 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 OR9G4Q8NGQ1 327 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 LINC00476Q8WZB0 136 aa9.25□□□□□ -0.93
UBR4-211ENST00000467272 Q96M66 194 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms