RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 PARP12Q9H0J9 701 aaKnown RBP13.51□□□□□ -0.25
TOM1-213ENST00000465529 PLGRKTQ9HBL7 147 aa13.51□□□□□ -0.25
TOM1-213ENST00000465529 LIN7CQ9NUP9 197 aaKnown RBP13.51□□□□□ -0.25
TOM1-213ENST00000465529 JPT1Q9UK76 154 aa13.51□□□□□ -0.25
TOM1-213ENST00000465529 SLC17A2O00624 439 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 LANCL1O43813 399 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 NAPSAO96009 420 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 SLC2A2P11168 524 aaPredicted RBP13.5□□□□□ -0.25
TOM1-213ENST00000465529 CNTFRP26992 372 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 CALRP27797 417 aaKnown RBP13.5□□□□□ -0.25
TOM1-213ENST00000465529 FOXRED2Q8IWF2 684 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 FAM71E2Q8N5Q1 922 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 OR51D1Q8NGF3 324 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 IL1F10Q8WWZ1 152 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 DUX3Q96PT4 197 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 MGLLQ99685 303 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 CHMP1AQ9HD42 196 aaPredicted RBP13.5□□□□□ -0.25
TOM1-213ENST00000465529 ISYNA1Q9NPH2 558 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 NECAP2Q9NVZ3 263 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 AK3Q9UIJ7 227 aa13.5□□□□□ -0.25
TOM1-213ENST00000465529 SAA2-SAA4A0A096LPE2 208 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 ST8SIA5O15466 376 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 TXNL1O43396 289 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 YPEL1O60688 119 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 SAA2P0DJI9 122 aaPredicted RBP13.49□□□□□ -0.25
TOM1-213ENST00000465529 ARSBP15848 533 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 HTD2P86397 168 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 SSX1Q16384 188 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 ZNF880Q6PDB4 577 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 MRPL41Q8IXM3 137 aaKnown RBP13.49□□□□□ -0.25
TOM1-213ENST00000465529 LINC00482Q8N8I6 264 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 KLHL30-AS1Q8NEE0 82 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 MRAPQ8TCY5 172 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 GALMQ96C23 342 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 YPEL2Q96QA6 119 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 RASL11BQ9BPW5 248 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 NABP2Q9BQ15 211 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 IFI27L2Q9H2X8 130 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 PLEKHJ1Q9NW61 149 aa13.49□□□□□ -0.25
TOM1-213ENST00000465529 SHISA3A0PJX4 238 aa13.48□□□□□ -0.25
TOM1-213ENST00000465529 FOXI3A8MTJ6 420 aaPredicted RBP13.48□□□□□ -0.25
TOM1-213ENST00000465529 NUDT19A8MXV4 375 aa13.48□□□□□ -0.25
TOM1-213ENST00000465529 AP4M1O00189 453 aa13.48□□□□□ -0.25
TOM1-213ENST00000465529 RPLP1P05386 114 aaKnown RBP13.48□□□□□ -0.25
TOM1-213ENST00000465529 TMEM50BP56557 158 aa13.48□□□□□ -0.25
TOM1-213ENST00000465529 SLC35B1P78383 322 aa13.48□□□□□ -0.25
TOM1-213ENST00000465529 RAB11BQ15907 218 aa13.48□□□□□ -0.25
TOM1-213ENST00000465529 HES5Q5TA89 166 aa13.48□□□□□ -0.25
TOM1-213ENST00000465529 STEAP3Q658P3 488 aa13.48□□□□□ -0.25
TOM1-213ENST00000465529 ZNF554Q86TJ5 538 aa13.48□□□□□ -0.25
TOM1-213ENST00000465529 OR1A1Q9P1Q5 309 aa13.48□□□□□ -0.25
TOM1-213ENST00000465529 HOXD3P31249 432 aaPredicted RBP13.47□□□□□ -0.25
TOM1-213ENST00000465529 THBS3P49746 956 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 VEGFCP49767 419 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 OR10A3P58181 314 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 KRTAP10-11P60412 298 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 MMDQ15546 238 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 TRAM1Q15629 374 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 TBCEQ15813 527 aaPredicted RBP13.47□□□□□ -0.25
TOM1-213ENST00000465529 RPL39P5Q59GN2 51 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 ZNF833PQ6ZTB9 187 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 OR2AK2Q8NG84 335 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 ARHGAP5-AS1Q96IT6 56 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 VCX3BQ9H321 246 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 ABRACLQ9P1F3 81 aa13.47□□□□□ -0.25
TOM1-213ENST00000465529 ARL6IP5O75915 188 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 SOX6P35712 828 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 ACTBP60709 375 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 CFHR3Q02985 330 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 DEFB136Q30KP8 78 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 C2orf76Q3KRA6 126 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 PLAC9Q5JTB6 97 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 GLDNQ6ZMI3 551 aaPredicted RBP13.46□□□□□ -0.25
TOM1-213ENST00000465529 FAM89BQ8N5H3 189 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 FAM3DQ96BQ1 224 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 ABHD14BQ96IU4 210 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 ZNF251Q9BRH9 671 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 URM1Q9BTM9 101 aaKnown RBP13.46□□□□□ -0.25
TOM1-213ENST00000465529 PECRQ9BY49 303 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 ACOT13Q9NPJ3 140 aa13.46□□□□□ -0.25
TOM1-213ENST00000465529 TMEM272A0A1B0GTI8 110 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 RGS11O94810 467 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 SCTP09683 121 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 SNRPBP14678 240 aaKnown RBP13.45□□□□□ -0.26
TOM1-213ENST00000465529 PSMA1P25786 263 aaKnown RBP13.45□□□□□ -0.26
TOM1-213ENST00000465529 HSPA13P48723 471 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 HLA-DRB3P79483 266 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 PNLIPRP3Q17RR3 467 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 LY6G6FQ5SQ64 297 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 TEX38Q6PEX7 206 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 FAM131AQ6UXB0 335 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 ZNF367Q7RTV3 350 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 REC114Q7Z4M0 266 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 OR8H1Q8NGG4 311 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 RCC1LQ96I51 464 aaKnown RBP13.45□□□□□ -0.26
TOM1-213ENST00000465529 RAX2Q96IS3 184 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 ZFP57Q9NU63 452 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 SLC23A1Q9UHI7 598 aa13.45□□□□□ -0.26
TOM1-213ENST00000465529 ZNF107Q9UII5 783 aaPredicted RBP13.45□□□□□ -0.26
TOM1-213ENST00000465529 V9GY05 133 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms