RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SMIM19Q96E16 107 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 MRPS24Q96EL2 167 aaKnown RBP7.53□□□□□ -1.2
USP39-212ENST00000465514 RITA1Q96K30 269 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 UBE2E2Q96LR5 201 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 SPATA25Q9BR10 227 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 CHCHD6Q9BRQ6 235 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 BANF2Q9H503 90 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 OR2S2Q9NQN1 319 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 CKLFQ9UBR5 152 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 CLEC2DQ9UHP7 191 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 MRPS28Q9Y2Q9 187 aaKnown RBP7.53□□□□□ -1.2
USP39-212ENST00000465514 PEX16Q9Y5Y5 336 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 A0A1W2PPK0 400 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 UBE2QL1A1L167 161 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 IGLV1-40P01703 118 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 OR8U8P0C7N1 319 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 SPNP16150 400 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 FUT3P21217 361 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 CNTFRP26992 372 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 PPIFP30405 207 aaKnown RBP7.52□□□□□ -1.21
USP39-212ENST00000465514 INSL3P51460 131 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 ACTBP60709 375 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 RPS11P62280 158 aaKnown RBP eCLIP7.52□□□□□ -1.21
USP39-212ENST00000465514 GNB1P62873 340 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 RUNX1Q01196 453 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 ZNF616Q08AN1 781 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 GNMTQ14749 295 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 SRSF7Q16629 238 aaKnown RBP eCLIP7.52□□□□□ -1.21
USP39-212ENST00000465514 Q499Y3 187 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 MORN2Q502X0 79 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 DMKNQ6E0U4 476 aaPredicted RBP7.52□□□□□ -1.21
USP39-212ENST00000465514 TRAT1Q6PIZ9 186 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 C5orf24Q7Z6I8 188 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 C10orf67Q8IYJ2 551 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 RPP25LQ8N5L8 163 aaKnown RBP7.52□□□□□ -1.21
USP39-212ENST00000465514 JAGN1Q8N5M9 183 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 ZFP41Q8N8Y5 198 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 ZNF555Q8NEP9 628 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 OR52L2PQ8NGH6 319 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 CYYR1Q96J86 154 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 OR5B12Q96R08 314 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 SELENOIQ9C0D9 397 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 OR51J1Q9H342 316 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 TAF9BQ9HBM6 251 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 PARP11Q9NR21 331 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 DIMT1Q9UNQ2 313 aaKnown RBP7.52□□□□□ -1.21
USP39-212ENST00000465514 VSIG4Q9Y279 399 aa7.52□□□□□ -1.21
USP39-212ENST00000465514 TRBV5-7A0A0A0MS05 114 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 IGHV7-81A0A0B4J1V7 117 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 TRAV41A0A0B4J266 112 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 IRGMA1A4Y4 181 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 FAM90A10PA6NDY2 464 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 ATP6V0E1O15342 81 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 CA11O75493 328 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 CRTAPO75718 401 aaPredicted RBP7.51□□□□□ -1.21
USP39-212ENST00000465514 SC5DO75845 299 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 HLA-DRB1P01911 266 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 GLAP06280 429 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 IGHV4-30-4P0DP06 118 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 GP9P14770 177 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 MGMTP16455 207 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 MYL12AP19105 171 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 FSTP19883 344 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 PPP1CCP36873 323 aaKnown RBP7.51□□□□□ -1.21
USP39-212ENST00000465514 RAB9AP51151 201 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 YIF1BQ5BJH7 314 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 AWAT2Q6E213 333 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 SIGIRRQ6IA17 410 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 ODF3L1Q8IXM7 274 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 DCUN1D4Q92564 292 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 PGLYRP3Q96LB9 341 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 RDH12Q96NR8 316 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 OR14A2Q96R54 314 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 NABP2Q9BQ15 211 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 ZNF251Q9BRH9 671 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 ABHD14AQ9BUJ0 271 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 MRPL20Q9BYC9 149 aaKnown RBP7.51□□□□□ -1.21
USP39-212ENST00000465514 ANKRD60Q9BZ19 345 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 S100A14Q9HCY8 104 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 ISYNA1Q9NPH2 558 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 KCNIP1Q9NZI2 227 aa7.51□□□□□ -1.21
USP39-212ENST00000465514 EXOSC1Q9Y3B2 195 aaKnown RBP7.51□□□□□ -1.21
USP39-212ENST00000465514 FAM90A7PA6NKC0 464 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 FAM90A23PA8MXZ1 464 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 OVOL1O14753 267 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 NBR2O15453 112 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 MAS1P04201 325 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 IFNA6P05013 189 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 BLVRBP30043 206 aaPredicted RBP7.5□□□□□ -1.21
USP39-212ENST00000465514 OR3A3P47888 321 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 HTD2P86397 168 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 C5orf64Q2M2E5 130 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 LIN54Q6MZP7 749 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 ZNF429Q86V71 674 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 CDH26Q8IXH8 852 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 PQLC1Q8N2U9 271 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 MINDY2Q8NBR6 621 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 ZNF485Q8NCK3 441 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 MRPL30Q8TCC3 161 aaKnown RBP7.5□□□□□ -1.21
USP39-212ENST00000465514 TMEM80Q96HE8 168 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms