RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 GPM6AP51674 278 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 MTCP1P56278 107 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 SURF2Q15527 256 aaPredicted RBP6.53□□□□□ -1.36
USP4-207ENST00000462673 KRBOX4Q5JUW0 171 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 TMEM42Q69YG0 159 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 DHRS11Q6UWP2 260 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 LHFPL2Q6ZUX7 228 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 Q8IYB0 196 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 PNLDC1Q8NA58 520 aaKnown RBP6.53□□□□□ -1.36
USP4-207ENST00000462673 OR4K15Q8NH41 348 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 SOX7Q9BT81 388 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 PKIBQ9C010 78 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 BPESC1Q9GZL8 116 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 CHST5Q9GZS9 411 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 FAM212BQ9NTI7 297 aaPredicted RBP6.53□□□□□ -1.36
USP4-207ENST00000462673 UFSP2Q9NUQ7 469 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 C1orf123Q9NWV4 160 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 OR5AC2Q9NZP5 309 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 C14orf166Q9Y224 244 aaKnown RBP6.53□□□□□ -1.36
USP4-207ENST00000462673 TACC2O95359 2948 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 IGHV4-30-2A0A087WSY4 118 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 FAM230AA0A1W2PPH8 454 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 C7orf77A4D0Y5 90 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 VWC2LB2RUY7 222 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 B4DSR2 109 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 LYNX1G3V0Z9 82 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 H0YIZ8 118 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 H7C1Q1 480 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 K7EPK0 472 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 CDIPTO14735 213 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 FOXH1O75593 365 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 LY6HO94772 140 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 IFNA10P01566 189 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 PMP2P02689 132 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 SNRNP70P08621 437 aaKnown RBP6.52□□□□□ -1.37
USP4-207ENST00000462673 HCKP08631 526 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 FCGR3AP08637 254 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 LYNX1P0DP58 116 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 HKR1P10072 659 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 ZNF44P15621 663 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 AMY2BP19961 511 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 GATA3P23771 443 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 S100A2P29034 98 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 RBMXP38159 391 aaKnown RBP6.52□□□□□ -1.37
USP4-207ENST00000462673 UNC119Q13432 240 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 RAB32Q13637 225 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 SLC9A3R2Q15599 337 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 OR2B11Q5JQS5 317 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 RPL7L1Q6DKI1 246 aaKnown RBP6.52□□□□□ -1.37
USP4-207ENST00000462673 OR52W1Q6IF63 320 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 FAM90A1Q86YD7 464 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 FAM71E2Q8N5Q1 922 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 SCCPDHQ8NBX0 429 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 OR56B1Q8NGI3 324 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 OR4D6Q8NGJ1 314 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 OR51A2Q8NGJ7 313 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 TERB2Q8NHR7 220 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 LYPD6BQ8NI32 183 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 RNASE11Q8TAA1 199 aaKnown RBP6.52□□□□□ -1.37
USP4-207ENST00000462673 TMEM230Q96A57 120 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 RAB3CQ96E17 227 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 AKR1E2Q96JD6 320 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 GPER1Q99527 375 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 RNF126Q9BV68 326 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 TMUB1Q9BVT8 246 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 OR51I2Q9H344 312 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 METTL8Q9H825 291 aaKnown RBP6.52□□□□□ -1.37
USP4-207ENST00000462673 PLEKHA2Q9HB19 425 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 GFOD1Q9NXC2 390 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 TREM2Q9NZC2 230 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 FBXL17Q9UF56 701 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 WIPI2Q9Y4P8 454 aa6.52□□□□□ -1.37
USP4-207ENST00000462673 ANKRD17O75179 2603 aaKnown RBP6.52□□□□□ -1.37
USP4-207ENST00000462673 hCG_1809904A0A1W2PP81 198 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 A0A1W2PR64 198 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 A0A1W2PRV1 198 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 C5orf63A6NC05 138 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 OOEPA6NGQ2 149 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 TMEM14DPA8MWL7 114 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 UMAD1C9J7I0 102 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 TRAPPC2LH3BP13 241 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 SMAD7O15105 426 aaKnown RBP6.51□□□□□ -1.37
USP4-207ENST00000462673 LILRA1O75019 489 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 LHBP01229 141 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 IFNA21P01568 189 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 LIPFP07098 398 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 OR8U9P0C7N5 309 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 NQO2P16083 231 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 HIST1H1DP16402 221 aaKnown RBP6.51□□□□□ -1.37
USP4-207ENST00000462673 GLRA1P23415 457 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 MAS1LP35410 378 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 SNCAP37840 140 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 CAMLGP49069 296 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 SULT1A1P50225 295 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 PRSS12P56730 875 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 CD81P60033 236 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 DEFA6Q01524 100 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 IL24Q13007 206 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 ZNF154Q13106 437 aa6.51□□□□□ -1.37
USP4-207ENST00000462673 CLINT1Q14677 625 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms