RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 NECAP1Q8NC96 275 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 ZBTB34Q8NCN2 500 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 CPEB3Q8NE35 698 aaKnown RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 OR2T10Q8NGZ9 312 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 OR4X1Q8NH49 305 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 ABHD5Q8WTS1 349 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 ABHD3Q8WU67 409 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM170AQ8WVE7 144 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 RDH5Q92781 318 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 TAF15Q92804 592 aaKnown RBP eCLIP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM18Q96B42 140 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 APH1AQ96BI3 265 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 RPUSD4Q96CM3 377 aaKnown RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 NEIL1Q96FI4 390 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 C14orf144Q96I85 54 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 MEGF10Q96KG7 1140 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 CIB3Q96Q77 187 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 OR4C12Q96R67 309 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 TAAR6Q96RI8 345 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 GPHA2Q96T91 129 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 FAM173AQ9BQD7 235 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 PYGO2Q9BRQ0 406 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 C2orf88Q9BSF0 95 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 NDUFAF3Q9BU61 184 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 PRRG4Q9BZD6 226 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 FGF23Q9GZV9 251 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 PRO1933Q9H354 126 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF576Q9H609 170 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 VSIRQ9H7M9 311 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 UBE2ZQ9H832 354 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 SLC25A22Q9H936 323 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 AKIRIN1Q9H9L7 192 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-204ENST00000462604 PLSCR4Q9NRQ2 329 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 DLL3Q9NYJ7 618 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 KCNIP1Q9NZI2 227 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 MTCH1Q9NZJ7 389 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 OR1A1Q9P1Q5 309 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 WNT16Q9UBV4 365 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 OR14J1Q9UGF5 321 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 TRAPPC2LQ9UL33 140 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 PPP1R3CQ9UQK1 317 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 POLDIP2Q9Y2S7 368 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 CPAMD8Q8IZJ3 1885 aa2.99□□□□□ -1.93
COL8A1-204ENST00000462604 SCN3AQ9NY46 2000 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 C2orf16Q68DN1 1984 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 TICRRQ7Z2Z1 1910 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 NINQ8N4C6 2090 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 A0A1B0GV90 55 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 A0A1W2PPQ1 181 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM30CPA0ZSE6 113 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF705GA8MUZ8 300 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 KIAA1324LA8MWY0 1029 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 F6UZH7 168 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 J3QW42 95 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 SIRPB1O00241 398 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 SH2D1BO14796 132 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 PHOX2AO14813 284 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 RAB29O14966 203 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 ATXN7O15265 892 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 ST8SIA5O15466 376 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 PDE6DO43924 150 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 SOX15O60248 233 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 WDR1O75083 606 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 SS18L1O75177 396 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 GGCTO75223 188 aaKnown RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 RBMXL2O75526 392 aaKnown RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 KLF7O75840 302 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 NXPH2O95156 264 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 CER1O95813 267 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 IGKV1-39P01597 117 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 AMBPP02760 352 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 IGKV1D-39P04432 117 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 TYMSP04818 313 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 CFIP05156 583 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 PFN1P07737 140 aaKnown RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 RFPL3SP0C7P2 107 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 RNF224P0DH78 156 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 CCL4P13236 92 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 CD99P14209 185 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 PAX1P15863 534 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 SELEP16581 610 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 MDKP21741 143 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 CYB561P49447 251 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 LHX2P50458 406 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 PDLIM4P50479 330 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 GFRA1P56159 465 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 ERVS71-1P61550 626 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 RPL23P62829 140 aaKnown RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 RPP30P78346 268 aaKnown RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 LCN2P80188 198 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 SRYQ05066 204 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 ARL16Q0P5N6 197 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 MRPL49Q13405 166 aaKnown RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 SLC10A1Q14973 349 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 USF2Q15853 346 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-204ENST00000462604 IGFBP7Q16270 282 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 IQCJQ1A5X6 159 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 IZUMO4Q1ZYL8 232 aa2.98□□□□□ -1.93
COL8A1-204ENST00000462604 HLA-BQ31612 363 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms