RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ZNF491Q8N8L2 437 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 MYOZ3Q8TDC0 251 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 Q96M66 194 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 UQCC2Q9BRT2 126 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 MRPL20Q9BYC9 149 aaKnown RBP11.99□□□□□ -0.49
SKA3-204ENST00000462482 GHITMQ9H3K2 345 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 GNB4Q9HAV0 340 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 MBNL3Q9NUK0 354 aaKnown RBP11.99□□□□□ -0.49
SKA3-204ENST00000462482 STEAP1Q9UHE8 339 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 EFCAB10A6NFE3 127 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 G3V318 75 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 OVOL1O14753 267 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 MYL12BO14950 172 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 YPEL1O60688 119 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 SAP30O75446 220 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 PPIFP30405 207 aaKnown RBP11.98□□□□□ -0.49
SKA3-204ENST00000462482 RAB9AP51151 201 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 RPS11P62280 158 aaKnown RBP eCLIP11.98□□□□□ -0.49
SKA3-204ENST00000462482 GABPB1Q06547 395 aaPredicted RBP11.98□□□□□ -0.49
SKA3-204ENST00000462482 ST3GAL4Q11206 333 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 GNMTQ14749 295 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 C5orf64Q2M2E5 130 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 ABHD5Q8WTS1 349 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 FAM46BQ96A09 425 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 PGLYRP3Q96LB9 341 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 YPEL2Q96QA6 119 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 NABP2Q9BQ15 211 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 ANKRD60Q9BZ19 345 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 KLK15Q9H2R5 256 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 ISYNA1Q9NPH2 558 aa11.98□□□□□ -0.49
SKA3-204ENST00000462482 I3L521 148 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 IGLV1-40P01703 118 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 UBBP0CG47 229 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 CELP19835 753 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 CD40LGP29965 261 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 BLVRBP30043 206 aaPredicted RBP11.97□□□□□ -0.49
SKA3-204ENST00000462482 TMEM267Q0VDI3 215 aaPredicted RBP11.97□□□□□ -0.49
SKA3-204ENST00000462482 ECSCRQ19T08 205 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 LY6G6FQ5SQ64 297 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 TCTEX1D1Q8N7M0 179 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 MRPL30Q8TCC3 161 aaKnown RBP11.97□□□□□ -0.49
SKA3-204ENST00000462482 IL1F10Q8WWZ1 152 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 DERL3Q96Q80 235 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 CHMP1AQ9HD42 196 aaPredicted RBP11.97□□□□□ -0.49
SKA3-204ENST00000462482 C8orf4Q9NR00 106 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 PIPOXQ9P0Z9 390 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 RNF150Q9ULK6 438 aa11.97□□□□□ -0.49
SKA3-204ENST00000462482 KMT2CQ8NEZ4 4911 aaKnown RBP11.97□□□□□ -0.49
SKA3-204ENST00000462482 IGHV7-81A0A0B4J1V7 117 aa11.96□□□□□ -0.49
SKA3-204ENST00000462482 GNB1P62873 340 aa11.96□□□□□ -0.49
SKA3-204ENST00000462482 ZNF660Q6AZW8 331 aaPredicted RBP11.96□□□□□ -0.49
SKA3-204ENST00000462482 FAM71F2Q6NXP2 309 aa11.96□□□□□ -0.49
SKA3-204ENST00000462482 ZNF833PQ6ZTB9 187 aa11.96□□□□□ -0.49
SKA3-204ENST00000462482 DHRSXQ8N5I4 330 aa11.96□□□□□ -0.49
SKA3-204ENST00000462482 NPBQ8NG41 125 aa11.96□□□□□ -0.49
SKA3-204ENST00000462482 DCUN1D4Q92564 292 aa11.96□□□□□ -0.49
SKA3-204ENST00000462482 GGHQ92820 318 aa11.96□□□□□ -0.49
SKA3-204ENST00000462482 RBMXL1Q96E39 390 aaKnown RBP11.96□□□□□ -0.49
SKA3-204ENST00000462482 FOXA2Q9Y261 457 aaPredicted RBP11.96□□□□□ -0.49
SKA3-204ENST00000462482 SAA2-SAA4A0A096LPE2 208 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 A0A1W2PN81 502 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 LINC01619G3V211 115 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 RAB29O14966 203 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 CD1AP06126 327 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 GSTP1P09211 210 aaKnown RBP11.95□□□□□ -0.5
SKA3-204ENST00000462482 SAA2P0DJI9 122 aaPredicted RBP11.95□□□□□ -0.5
SKA3-204ENST00000462482 CNTFRP26992 372 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 MC5RP33032 325 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 CHRNA7P36544 502 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 OR3A3P47888 321 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 WNT4P56705 351 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 GLT8D1Q68CQ7 371 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 SIGIRRQ6IA17 410 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 PYHIN1Q6K0P9 492 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 MINDY2Q8NBR6 621 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 OR6Q1Q8NGQ2 317 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 SETD6Q8TBK2 473 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 CNOT2Q9NZN8 540 aaKnown RBP11.95□□□□□ -0.5
SKA3-204ENST00000462482 A3GALT2U3KPV4 340 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 COL7A1Q02388 2944 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 DNAH9Q9NYC9 4486 aa11.95□□□□□ -0.5
SKA3-204ENST00000462482 H7C2Y5 167 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 NDUFA3O95167 84 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 KIAA0141Q14154 515 aaPredicted RBP11.94□□□□□ -0.5
SKA3-204ENST00000462482 HMGN3Q15651 99 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 LRRC36Q1X8D7 754 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 FAM131AQ6UXB0 335 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 ODF3L1Q8IXM7 274 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 C8orf59Q8N0T1 100 aaPredicted RBP11.94□□□□□ -0.5
SKA3-204ENST00000462482 PACRGLQ8N7B6 248 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 ZNF485Q8NCK3 441 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 KCNG3Q8TAE7 436 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 FLYWCH2Q96CP2 140 aaKnown RBP11.94□□□□□ -0.5
SKA3-204ENST00000462482 RITA1Q96K30 269 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 OR4C12Q96R67 309 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 TMEM59Q9BXS4 323 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 ZMAT4Q9H898 229 aa11.94□□□□□ -0.5
SKA3-204ENST00000462482 OR5H14A6NHG9 310 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 RRHO14718 337 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 ARPC1BO15143 372 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms