RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 PDCD6O75340 191 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 LY86O95711 162 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 BAG2O95816 211 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 IGLV1-40P01703 118 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 OR8U8P0C7N1 319 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 BLVRBP30043 206 aaPredicted RBP12.5□□□□□ -0.41
COL7A1-204ENST00000462475 OR3A3P47888 321 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 NDPQ00604 133 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 RUNX1Q01196 453 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 ZNF616Q08AN1 781 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 TMEM65Q6PI78 240 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 CDH26Q8IXH8 852 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 CYGBQ8WWM9 190 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 ZNF251Q9BRH9 671 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 CHCHD6Q9BRQ6 235 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 ANKRD60Q9BZ19 345 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 ISYNA1Q9NPH2 558 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
COL7A1-204ENST00000462475 KCNIP1Q9NZI2 227 aa12.5□□□□□ -0.41
COL7A1-204ENST00000462475 TRAV41A0A0B4J266 112 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 NBR2O15453 112 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 GLAP06280 429 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 CHATP28329 748 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 CAPGP40121 348 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 MED21Q13503 144 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 C5orf64Q2M2E5 130 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 C6orf141Q5SZD1 244 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 ZNF833PQ6ZTB9 187 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 ZNF554Q86TJ5 538 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 GGHQ92820 318 aa12.49□□□□□ -0.41
COL7A1-204ENST00000462475 ALX4Q9H161 411 aaPredicted RBP12.49□□□□□ -0.41
COL7A1-204ENST00000462475 SACSQ9NZJ4 4579 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 SAA2-SAA4A0A096LPE2 208 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 YPEL1O60688 119 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 SAA2P0DJI9 122 aaPredicted RBP12.48□□□□□ -0.41
COL7A1-204ENST00000462475 RAB9AP51151 201 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 INSL3P51460 131 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 TAS2R43P59537 309 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 HTD2P86397 168 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 ST3GAL4Q11206 333 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 ECSCRQ19T08 205 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 NKAIN3Q8N8D7 197 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 NPBQ8NG41 125 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 DCUN1D4Q92564 292 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 YPEL2Q96QA6 119 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 SULT4A1Q9BR01 284 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 IFI27L2Q9H2X8 130 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 FBXO7Q9Y3I1 522 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 SMAD5-AS1Q9Y6J3 95 aa12.48□□□□□ -0.41
COL7A1-204ENST00000462475 SOX15O60248 233 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 NDUFA3O95167 84 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 CELP19835 753 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 HMGN3Q15651 99 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 LRRC36Q1X8D7 754 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 C19orf54Q5BKX5 351 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 LIN54Q6MZP7 749 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 MINDY2Q8NBR6 621 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 OR2AK2Q8NG84 335 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 CASTOR1Q8WTX7 329 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 UQCC2Q9BRT2 126 aa12.47□□□□□ -0.41
COL7A1-204ENST00000462475 C3orf84H3BNL1 204 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 OVOL1O14753 267 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 ST8SIA5O15466 376 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 SLURP1P55000 103 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 INSL4Q14641 139 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 LY6G6FQ5SQ64 297 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 TTC23Q5W5X9 447 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 OR10K2Q6IF99 312 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 FAM131AQ6UXB0 335 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 ZNF429Q86V71 674 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 SETD9Q8NE22 299 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 DLX4Q92988 240 aaPredicted RBP12.46□□□□□ -0.41
COL7A1-204ENST00000462475 GALMQ96C23 342 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 CST11Q9H112 138 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 KIAA1456Q9P272 454 aa12.46□□□□□ -0.41
COL7A1-204ENST00000462475 A0A1W2PN81 502 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 EFCAB10A6NFE3 127 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 MYL12BO14950 172 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 SAP30O75446 220 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 RGS11O94810 467 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 CHRNA7P36544 502 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 RPL39P5Q59GN2 51 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 FAM27D1Q5T7N8 215 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 LAIR2Q6ISS4 152 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 AHSA2Q719I0 299 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 C6orf201Q7Z4U5 140 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 SBSPONQ8IVN8 264 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 SVOPQ8N4V2 548 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 IL1F10Q8WWZ1 152 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 TOLLIPQ9H0E2 274 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 PARP12Q9H0J9 701 aaKnown RBP12.45□□□□□ -0.42
COL7A1-204ENST00000462475 KCNK15Q9H427 330 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 FBXL15Q9H469 300 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 GHRLQ9UBU3 117 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 A3GALT2U3KPV4 340 aa12.45□□□□□ -0.42
COL7A1-204ENST00000462475 STARD9Q9P2P6 4700 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 CD1AP06126 327 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 SPNP16150 400 aa12.44□□□□□ -0.42
COL7A1-204ENST00000462475 MAPK3P27361 379 aaPredicted RBP12.44□□□□□ -0.42
COL7A1-204ENST00000462475 CRIP2P52943 208 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms