RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 USF2Q15853 346 aaPredicted RBP3.83□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF718Q3SXZ3 478 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 BEX5Q5H9J7 111 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 CLVS2Q5SYC1 327 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 HES5Q5TA89 166 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 STEAP1BQ6NZ63 245 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 SFXN4Q6P4A7 337 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 Q6ZR03 302 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 UTS2BQ765I0 119 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 WDR86Q86TI4 376 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 TMEM219Q86XT9 240 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 NUP37Q8NFH4 326 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 OR5D14Q8NGL3 314 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF596Q8TC21 504 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 LRRC20Q8TCA0 184 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 MARCH1Q8TCQ1 289 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 PP6455Q8WZ26 134 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 GTF3AQ92664 365 aaKnown RBP3.83□□□□□ -1.8
CSMD3-205ENST00000462254 PIK3IP1Q96FE7 263 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 C17orf77Q96MU5 243 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 NEDD4LQ96PU5 975 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 TMEM204Q9BSN7 226 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 PAPOLGQ9BWT3 736 aaKnown RBP3.83□□□□□ -1.8
CSMD3-205ENST00000462254 NXF2Q9GZY0 626 aaKnown RBP3.83□□□□□ -1.8
CSMD3-205ENST00000462254 SHARPINQ9H0F6 387 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 SLITRK2Q9H156 845 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 CA10Q9NS85 328 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 CCDC59Q9P031 241 aaKnown RBP3.83□□□□□ -1.8
CSMD3-205ENST00000462254 RNF7Q9UBF6 113 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 PURGQ9UJV8 347 aaKnown RBP3.83□□□□□ -1.8
CSMD3-205ENST00000462254 V9GY05 133 aa3.83□□□□□ -1.8
CSMD3-205ENST00000462254 USP9XQ93008 2570 aaPredicted RBP3.83□□□□□ -1.8
CSMD3-205ENST00000462254 COL12A1Q99715 3063 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 DOPEY1Q5JWR5 2465 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 TMEM272A0A1B0GTI8 110 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 PQLC2LA1A4F0 135 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 LRP5LA4QPB2 252 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 NKX6-3A6NJ46 265 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 IFITM5A6NNB3 132 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 J3QKU1 62 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 AIPO00170 330 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 SLC17A2O00624 439 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 PDCD5O14737 125 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 NDUFB8O95169 186 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 CLDN1O95832 211 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 CST4P01036 141 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 IGHV3-13P01766 116 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 ALDOBP05062 364 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 HCKP08631 526 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 SELEP16581 610 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 RBMXP38159 391 aaKnown RBP3.82□□□□□ -1.8
CSMD3-205ENST00000462254 OR3A4PP47883 348 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 RORCP51449 518 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 CLDN12P56749 244 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 KLF3P57682 345 aaPredicted RBP3.82□□□□□ -1.8
CSMD3-205ENST00000462254 RPS23P62266 143 aaKnown RBP3.82□□□□□ -1.8
CSMD3-205ENST00000462254 PPP3R1P63098 170 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 KISS1Q15726 138 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 DGUOKQ16854 277 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF404Q494X3 552 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 SPRNQ5BIV9 151 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 C1orf100Q5SVJ3 147 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 IDNKQ5T6J7 187 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 MORN5Q5VZ52 161 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 CALHM1Q8IU99 346 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 ODF3L1Q8IXM7 274 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 C1orf174Q8IYL3 243 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 OR8G5Q8NG78 346 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 OR10AD1Q8NGE0 317 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 OR10A7Q8NGE5 316 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 OR4D6Q8NGJ1 314 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 OR5D18Q8NGL1 313 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 OR5H6Q8NGV6 325 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 MCFD2Q8NI22 146 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 ANGPTL6Q8NI99 470 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 SYNPRQ8TBG9 265 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 LGALS14Q8TCE9 139 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 C17orf50Q8WW18 174 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 MRPL24Q96A35 216 aaKnown RBP3.82□□□□□ -1.8
CSMD3-205ENST00000462254 BORCS8Q96FH0 119 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 C1orf147Q96MC9 270 aaPredicted RBP3.82□□□□□ -1.8
CSMD3-205ENST00000462254 ADAT1Q9BUB4 502 aaKnown RBP3.82□□□□□ -1.8
CSMD3-205ENST00000462254 MIXL1Q9H2W2 232 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 METTL17Q9H7H0 456 aaPredicted RBP3.82□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF442Q9H7R0 627 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 TMEM138Q9NPI0 162 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 CKLFQ9UBR5 152 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 POU2F3Q9UKI9 436 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 GAB2Q9UQC2 676 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 TNFRSF18Q9Y5U5 241 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 MPC1Q9Y5U8 109 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 FLNCQ14315 2725 aa3.82□□□□□ -1.8
CSMD3-205ENST00000462254 IGKV1-12A0A0C4DH73 117 aa3.81□□□□□ -1.8
CSMD3-205ENST00000462254 A0A1W2PPI3 338 aa3.81□□□□□ -1.8
CSMD3-205ENST00000462254 PRSS44E7EML9 344 aa3.81□□□□□ -1.8
CSMD3-205ENST00000462254 F5H5P2 479 aa3.81□□□□□ -1.8
CSMD3-205ENST00000462254 ECDO95905 644 aaPredicted RBP3.81□□□□□ -1.8
CSMD3-205ENST00000462254 IGKV1D-12P01611 117 aa3.81□□□□□ -1.8
CSMD3-205ENST00000462254 EIF4EP06730 217 aaKnown RBP3.81□□□□□ -1.8
CSMD3-205ENST00000462254 OR4A8P0C604 315 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms