RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 KCNG3Q8TAE7 436 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 NEDD4LQ96PU5 975 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 RASL11BQ9BPW5 248 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 CHCHD6Q9BRQ6 235 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 MCRIP2Q9BUT9 160 aaKnown RBP7.2□□□□□ -1.26
BRCA1-207ENST00000461798 ISYNA1Q9NPH2 558 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 OR2S2Q9NQN1 319 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 SCN3BQ9NY72 215 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 NKX1-2Q9UD57 310 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-207ENST00000461798 LINC00527Q9UJ94 153 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 JPT1Q9UK76 154 aa7.2□□□□□ -1.26
BRCA1-207ENST00000461798 TRBV6-6A0A0A6YYG2 114 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 TMEM14DPA8MWL7 114 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 K7EIL1 84 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 RGS11O94810 467 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 BPNT1O95861 308 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 MPIG6BO95866 241 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 NAPSAO96009 420 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 HTR2CP28335 458 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 CDX1P47902 265 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-207ENST00000461798 F2RL1P55085 397 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 KRTAP10-11P60412 298 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 LSAMPQ13449 338 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 FOXE3Q13461 319 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 KIR2DS1Q14954 304 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 HMGN3Q15651 99 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 HSD17B12Q53GQ0 312 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 KHDC1LQ5JSQ8 128 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 FAM27D1Q5T7N8 215 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 OR10K2Q6IF99 312 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 C18orf65Q6ZTR6 163 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 C8orf86Q6ZUL3 223 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 FAM89BQ8N5H3 189 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 OR52L2PQ8NGH6 319 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 FAM46BQ96A09 425 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 GALMQ96C23 342 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 CYYR1Q96J86 154 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 SULT4A1Q9BR01 284 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 FAAP24Q9BTP7 215 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 ABHD14AQ9BUJ0 271 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 TMED9Q9BVK6 235 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 RIMS4Q9H426 269 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-207ENST00000461798 TPRKBQ9Y3C4 175 aa7.19□□□□□ -1.26
BRCA1-207ENST00000461798 ITGB1BP1O14713 200 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 RRP9O43818 475 aaKnown RBP7.18□□□□□ -1.26
BRCA1-207ENST00000461798 IGHG4P01861 327 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 MYF6P23409 242 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 SOX6P35712 828 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 UNC119Q13432 240 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 GNMTQ14749 295 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 MED22Q15528 200 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 TRAM1Q15629 374 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 NKAPLQ5M9Q1 402 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 TMEM91Q6ZNR0 172 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 ZNF833PQ6ZTB9 187 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 C6orf201Q7Z4U5 140 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 C5orf24Q7Z6I8 188 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 PRR18Q8N4B5 295 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 OR6M1Q8NGM8 313 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 NRG4Q8WWG1 115 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 NABP2Q9BQ15 211 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 HSPB9Q9BQS6 159 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 TMEM59Q9BXS4 323 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 LPAR5Q9H1C0 372 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 GHITMQ9H3K2 345 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 PGPEP1Q9NXJ5 209 aa7.18□□□□□ -1.26
BRCA1-207ENST00000461798 WI2-2373I1.2A0A1W2PRP0 233 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 FOXI3A8MTJ6 420 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-207ENST00000461798 NUDT19A8MXV4 375 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 ANKRD65E5RJM6 399 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 CCL24O00175 119 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 SLC17A2O00624 439 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 HLA-DRB1P01911 266 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 RPLP1P05386 114 aaKnown RBP7.17□□□□□ -1.26
BRCA1-207ENST00000461798 OR5H8P0DN80 308 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 PSMA1P25786 263 aaKnown RBP7.17□□□□□ -1.26
BRCA1-207ENST00000461798 PSMB8P28062 276 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 BLVRBP30043 206 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-207ENST00000461798 PPIFP30405 207 aaKnown RBP7.17□□□□□ -1.26
BRCA1-207ENST00000461798 PPP1CCP36873 323 aaKnown RBP7.17□□□□□ -1.26
BRCA1-207ENST00000461798 AQP4P55087 323 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 ACTBP60709 375 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 CXorf66Q5JRM2 361 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-207ENST00000461798 RBM48Q5RL73 367 aaKnown RBP7.17□□□□□ -1.26
BRCA1-207ENST00000461798 LIPKQ5VXJ0 399 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 FAM71F2Q6NXP2 309 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 KLHL30-AS1Q8NEE0 82 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 NPBQ8NG41 125 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 OR2AK2Q8NG84 335 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 MYOZ3Q8TDC0 251 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 UFD1Q92890 307 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 RAX2Q96IS3 184 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 RITA1Q96K30 269 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 GFI1Q99684 422 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 ZNF251Q9BRH9 671 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 NICN1Q9BSH3 213 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 ANKRD60Q9BZ19 345 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 ABRACLQ9P1F3 81 aa7.17□□□□□ -1.26
BRCA1-207ENST00000461798 ZMAT5Q9UDW3 170 aaKnown RBP7.17□□□□□ -1.26
BRCA1-207ENST00000461798 HSF4Q9ULV5 492 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms