RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 CA11O75493 328 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 GLAP06280 429 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 UBBP0CG47 229 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 THBS3P49746 956 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 SLC35B1P78383 322 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 Q3ZCU0 254 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 IZUMO2Q6UXV1 221 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 SVOPQ8N4V2 548 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 FAM71E2Q8N5Q1 922 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 CNBD2Q96M20 576 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 TM2D1Q9BX74 207 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 LPAR5Q9H1C0 372 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 PLGRKTQ9HBL7 147 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 RAB9BQ9NP90 201 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 AK3Q9UIJ7 227 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 JPT1Q9UK76 154 aa12.18□□□□□ -0.46
NUP50-213ENST00000461437 SAA2-SAA4A0A096LPE2 208 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 WI2-2373I1.2A0A1W2PRP0 233 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 AP4M1O00189 453 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 LANCL1O43813 399 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 SAA2P0DJI9 122 aaPredicted RBP12.17□□□□□ -0.46
NUP50-213ENST00000461437 SNRPBP14678 240 aaKnown RBP12.17□□□□□ -0.46
NUP50-213ENST00000461437 CRHBPP24387 322 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 FABP5Q01469 135 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 TPBGQ13641 420 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 MMDQ15546 238 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 TMEM30BQ3MIR4 351 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 RPL39P5Q59GN2 51 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 GLDNQ6ZMI3 551 aaPredicted RBP12.17□□□□□ -0.46
NUP50-213ENST00000461437 REC114Q7Z4M0 266 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 OR6M1Q8NGM8 313 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 KCNG3Q8TAE7 436 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 GALMQ96C23 342 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 NABP2Q9BQ15 211 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 ANKRD60Q9BZ19 345 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 IFI27L2Q9H2X8 130 aa12.17□□□□□ -0.46
NUP50-213ENST00000461437 TXNL1O43396 289 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 YPEL1O60688 119 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 BPNT1O95861 308 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 NAPSAO96009 420 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 CD37P11049 281 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 CPEP16870 476 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 CALRP27797 417 aaKnown RBP12.16□□□□□ -0.46
NUP50-213ENST00000461437 RAB25P57735 213 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 ACTBP60709 375 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 HES5Q5TA89 166 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 OR51D1Q8NGF3 324 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 RCC1LQ96I51 464 aaKnown RBP12.16□□□□□ -0.46
NUP50-213ENST00000461437 RAX2Q96IS3 184 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 ABHD14BQ96IU4 210 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 YPEL2Q96QA6 119 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 PLEKHJ1Q9NW61 149 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 OR1A1Q9P1Q5 309 aa12.16□□□□□ -0.46
NUP50-213ENST00000461437 SHISA3A0PJX4 238 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 G3V318 75 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 SLC17A2O00624 439 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 ARSBP15848 533 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 SOX6P35712 828 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 VEGFCP49767 419 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 HTD2P86397 168 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 MLLT11Q13015 90 aaPredicted RBP12.15□□□□□ -0.46
NUP50-213ENST00000461437 RAB11BQ15907 218 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 SSX1Q16384 188 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 ZNF880Q6PDB4 577 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 ZNF833PQ6ZTB9 187 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 ZNF695Q8IW36 515 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 OR2AK2Q8NG84 335 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 P2RX4Q99571 388 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 MGLLQ99685 303 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 ZNF107Q9UII5 783 aaPredicted RBP12.15□□□□□ -0.46
NUP50-213ENST00000461437 WSB1Q9Y6I7 421 aa12.15□□□□□ -0.46
NUP50-213ENST00000461437 FOXI3A8MTJ6 420 aaPredicted RBP12.14□□□□□ -0.47
NUP50-213ENST00000461437 SCTP09683 121 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 TMEM50BP56557 158 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 OR10A3P58181 314 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 CFHR3Q02985 330 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 TEX38Q6PEX7 206 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 FAM131AQ6UXB0 335 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 PRSS48Q7RTY5 328 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 ARHGAP5-AS1Q96IT6 56 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 KCTD7Q96MP8 289 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 ZNF251Q9BRH9 671 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 ZFP57Q9NU63 452 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 ABRACLQ9P1F3 81 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 SLC23A1Q9UHI7 598 aa12.14□□□□□ -0.47
NUP50-213ENST00000461437 A0A0B4J203 849 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 SMIM30A4D0T7 59 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 ATP6V0E1O15342 81 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 RGS11O94810 467 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 VDAC1P21796 283 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 MYCNOSP40205 109 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 LINC00205P59089 165 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 HLA-DRB3P79483 266 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 CXorf66Q5JRM2 361 aaPredicted RBP12.13□□□□□ -0.47
NUP50-213ENST00000461437 PLAC9Q5JTB6 97 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 STEAP3Q658P3 488 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 ZNF554Q86TJ5 538 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 PECRQ9BY49 303 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 ISYNA1Q9NPH2 558 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms