RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 EBI3Q14213 229 aa17.9■□□□□ 0.46
TRAF4-207ENST00000461195 C9orf152Q5JTZ5 239 aa17.9■□□□□ 0.46
TRAF4-207ENST00000461195 HIST2H2BDQ6DRA6 164 aa17.9■□□□□ 0.46
TRAF4-207ENST00000461195 LYG1Q8N1E2 194 aa17.9■□□□□ 0.46
TRAF4-207ENST00000461195 IL1F10Q8WWZ1 152 aa17.9■□□□□ 0.46
TRAF4-207ENST00000461195 HDHD3Q9BSH5 251 aaPredicted RBP17.9■□□□□ 0.46
TRAF4-207ENST00000461195 MGAT4AQ9UM21 535 aa17.9■□□□□ 0.46
TRAF4-207ENST00000461195 SSR3Q9UNL2 185 aa17.9■□□□□ 0.46
TRAF4-207ENST00000461195 FGF16O43320 207 aa17.89■□□□□ 0.45
TRAF4-207ENST00000461195 CD1BP29016 333 aa17.89■□□□□ 0.45
TRAF4-207ENST00000461195 C5orf56Q8N8D9 126 aa17.89■□□□□ 0.45
TRAF4-207ENST00000461195 OR2T10Q8NGZ9 312 aa17.89■□□□□ 0.45
TRAF4-207ENST00000461195 EAF1Q96JC9 268 aaPredicted RBP17.89■□□□□ 0.45
TRAF4-207ENST00000461195 C12orf4Q9NQ89 552 aa17.89■□□□□ 0.45
TRAF4-207ENST00000461195 LANCL1O43813 399 aa17.88■□□□□ 0.45
TRAF4-207ENST00000461195 RAB6AP20340 208 aa17.88■□□□□ 0.45
TRAF4-207ENST00000461195 PLAC9Q5JTB6 97 aa17.88■□□□□ 0.45
TRAF4-207ENST00000461195 CENPVQ7Z7K6 275 aaPredicted RBP17.88■□□□□ 0.45
TRAF4-207ENST00000461195 NR2C2APQ86WQ0 139 aa17.88■□□□□ 0.45
TRAF4-207ENST00000461195 FAM110DQ8TAY7 271 aaPredicted RBP17.88■□□□□ 0.45
TRAF4-207ENST00000461195 CMSS1Q9BQ75 279 aaKnown RBP17.88■□□□□ 0.45
TRAF4-207ENST00000461195 HLA-DRB3P79483 266 aa17.87■□□□□ 0.45
TRAF4-207ENST00000461195 NEDD8Q15843 81 aa17.87■□□□□ 0.45
TRAF4-207ENST00000461195 TPRA1Q86W33 373 aa17.87■□□□□ 0.45
TRAF4-207ENST00000461195 Q8N6K4 173 aa17.87■□□□□ 0.45
TRAF4-207ENST00000461195 OR2AK2Q8NG84 335 aa17.87■□□□□ 0.45
TRAF4-207ENST00000461195 OR5AU1Q8NGC0 362 aa17.87■□□□□ 0.45
TRAF4-207ENST00000461195 RAB3CQ96E17 227 aa17.87■□□□□ 0.45
TRAF4-207ENST00000461195 OR51E2Q9H255 320 aa17.87■□□□□ 0.45
TRAF4-207ENST00000461195 Q9N2K0 584 aa17.87■□□□□ 0.45
TRAF4-207ENST00000461195 CMYA5Q8N3K9 4069 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 A0A0B4J203 849 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 SMIM30A4D0T7 59 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 NOTOA8MTQ0 251 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 MOSP00540 346 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 GADD45AP24522 165 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 DEFA6Q01524 100 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 PDLIM3Q53GG5 364 aaPredicted RBP17.86■□□□□ 0.45
TRAF4-207ENST00000461195 NDUFA11Q86Y39 141 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 ODF3L1Q8IXM7 274 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 OR10R2Q8NGX6 335 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 PTX4Q96A99 478 aa17.86■□□□□ 0.45
TRAF4-207ENST00000461195 CITED2Q99967 270 aaPredicted RBP17.86■□□□□ 0.45
TRAF4-207ENST00000461195 METTL21EPA6NDL7 271 aa17.85■□□□□ 0.45
TRAF4-207ENST00000461195 NCBP2LA6PVI3 153 aaKnown RBP17.85■□□□□ 0.45
TRAF4-207ENST00000461195 ZNF736B4DX44 427 aaPredicted RBP17.85■□□□□ 0.45
TRAF4-207ENST00000461195 SLC2A2P11168 524 aaPredicted RBP17.85■□□□□ 0.45
TRAF4-207ENST00000461195 MRPS15P82914 257 aaKnown RBP17.85■□□□□ 0.45
TRAF4-207ENST00000461195 NSUN5P1Q3KNT7 163 aa17.85■□□□□ 0.45
TRAF4-207ENST00000461195 MOGAT2Q3SYC2 334 aa17.85■□□□□ 0.45
TRAF4-207ENST00000461195 KCTD7Q96MP8 289 aa17.85■□□□□ 0.45
TRAF4-207ENST00000461195 CHCHD6Q9BRQ6 235 aa17.85■□□□□ 0.45
TRAF4-207ENST00000461195 CD3GP09693 182 aa17.84■□□□□ 0.45
TRAF4-207ENST00000461195 LSAMPQ13449 338 aa17.84■□□□□ 0.45
TRAF4-207ENST00000461195 SLC23A1Q9UHI7 598 aa17.84■□□□□ 0.45
TRAF4-207ENST00000461195 KCNK7Q9Y2U2 307 aa17.84■□□□□ 0.45
TRAF4-207ENST00000461195 RAB27BO00194 218 aa17.83■□□□□ 0.44
TRAF4-207ENST00000461195 SCTP09683 121 aa17.83■□□□□ 0.44
TRAF4-207ENST00000461195 CD36P16671 472 aa17.83■□□□□ 0.44
TRAF4-207ENST00000461195 ZBTB25P24278 435 aa17.83■□□□□ 0.44
TRAF4-207ENST00000461195 ZNF833PQ6ZTB9 187 aa17.83■□□□□ 0.44
TRAF4-207ENST00000461195 OR8H1Q8NGG4 311 aa17.83■□□□□ 0.44
TRAF4-207ENST00000461195 IFI27L2Q9H2X8 130 aa17.83■□□□□ 0.44
TRAF4-207ENST00000461195 PIPOXQ9P0Z9 390 aa17.83■□□□□ 0.44
TRAF4-207ENST00000461195 SAA2-SAA4A0A096LPE2 208 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 LOC100506127A0A0U1RQW1 187 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 TRDCB7Z8K6 153 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 MFNGO00587 321 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 ITGB1BP1O14713 200 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 ST8SIA5O15466 376 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 HSPA12AO43301 675 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 SAA2P0DJI9 122 aaPredicted RBP17.82■□□□□ 0.44
TRAF4-207ENST00000461195 HIST1H1DP16402 221 aaKnown RBP17.82■□□□□ 0.44
TRAF4-207ENST00000461195 GNB3P16520 340 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 SDC2P34741 201 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 OR3A3P47888 321 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 CD83Q01151 205 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 FAM71F2Q6NXP2 309 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 Q8N9W7 124 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 OR4X2Q8NGF9 303 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 MRPL20Q9BYC9 149 aaKnown RBP17.82■□□□□ 0.44
TRAF4-207ENST00000461195 ATG5Q9H1Y0 275 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 PLSCR3Q9NRY6 295 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 LIN7CQ9NUP9 197 aaKnown RBP17.82■□□□□ 0.44
TRAF4-207ENST00000461195 OR1A1Q9P1Q5 309 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 DAPK2Q9UIK4 370 aa17.82■□□□□ 0.44
TRAF4-207ENST00000461195 A0A075B6Q4 140 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 ADARB2-AS1A8MUL3 147 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 RAB29O14966 203 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 TNFAIP8O95379 198 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 IGHG2P01859 326 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 CEACAM6P40199 344 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 SFXN4Q6P4A7 337 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 SLC35E3Q7Z769 313 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 EDARADDQ8WWZ3 215 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 S1PR3Q99500 378 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 NABP2Q9BQ15 211 aa17.81■□□□□ 0.44
TRAF4-207ENST00000461195 PARP12Q9H0J9 701 aaKnown RBP17.81■□□□□ 0.44
TRAF4-207ENST00000461195 A0A087WXM4 84 aa17.8■□□□□ 0.44
TRAF4-207ENST00000461195 PSMB11A5LHX3 300 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms