RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ALKBH3Q96Q83 286 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-203ENST00000460928 TSPAN32Q96QS1 320 aa4.05□□□□□ -1.76
ATPAF1-203ENST00000460928 EPYCQ99645 322 aa4.05□□□□□ -1.76
ATPAF1-203ENST00000460928 RBM24Q9BX46 236 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF430Q9H8G1 570 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-203ENST00000460928 REEP1Q9H902 201 aa4.05□□□□□ -1.76
ATPAF1-203ENST00000460928 KCNJ16Q9NPI9 418 aa4.05□□□□□ -1.76
ATPAF1-203ENST00000460928 MMP26Q9NRE1 261 aa4.05□□□□□ -1.76
ATPAF1-203ENST00000460928 PROCRQ9UNN8 238 aa4.05□□□□□ -1.76
ATPAF1-203ENST00000460928 KPTNQ9Y664 436 aa4.05□□□□□ -1.76
ATPAF1-203ENST00000460928 PKD1L1Q8TDX9 2849 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 IGKV3D-15A0A087WSY6 115 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 KIR2DL5BA0A0G2JN68 375 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 KIR2DL5BA0A0G2JPC4 375 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 A0A1W2PP11 408 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 A0A1W2PPR1 153 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 A0A1W2PQL4 384 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 SMCO3A2RU48 225 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 OOEPA6NGQ2 149 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF724A8MTY0 619 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 INAFM1C9JVW0 142 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 K7ERU9 68 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 DCTN6O00399 190 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 MFNGO00587 321 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 GNGT2O14610 69 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 FGF16O43320 207 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 RAMP3O60896 148 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 RAD51DO75771 328 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 DFFBO76075 338 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF432O94892 652 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 OR6A2O95222 327 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 MPZL1O95297 269 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 TCRBP04435 133 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 IL5P05113 134 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ERCC1P07992 297 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF735P0CB33 412 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF43P17038 809 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 CXCL2P19875 107 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 HOXD3P31249 432 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 RBM34P42696 430 aaKnown RBP4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 OR3A2P47893 321 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 AMTP48728 403 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ASCL1P50553 236 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 DAPP51397 102 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ERVS71-1P61550 626 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 PLA2G7Q13093 441 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 SLAQ13239 276 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 RAB35Q15286 201 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 GSG1Q2KHT4 349 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ELFN2Q5R3F8 820 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 BCL2L15Q5TBC7 163 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 LIPKQ5VXJ0 399 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 OR2A2Q6IF42 318 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 DRAM2Q6UX65 266 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 B3GLCTQ6Y288 498 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 FAM220AQ7Z4H9 259 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 FAM219AQ8IW50 185 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 KIR2DL5AQ8N109 375 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 OR6V1Q8N148 313 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 GABRG1Q8N1C3 465 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 CYB561A3Q8NBI2 242 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 SDR9C7Q8NEX9 313 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 TMEM185AQ8NFB2 350 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 OR10G2Q8NGC3 310 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 OR51D1Q8NGF3 324 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 OR5M8Q8NGP6 311 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 OR4K13Q8NH42 304 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 FGFBP3Q8TAT2 258 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 CNIH3Q8TBE1 160 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 GNPDA2Q8TDQ7 276 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 NPRL2Q8WTW4 380 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 HPSE2Q8WWQ2 592 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 NEUROG1Q92886 237 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 MRGPRFQ96AM1 343 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 APH1AQ96BI3 265 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 GALNT14Q96FL9 552 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 TMEM56Q96MV1 263 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF582Q96NG8 517 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 OXGR1Q96P68 337 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 SULT4A1Q9BR01 284 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 VPS25Q9BRG1 176 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 SLC25A33Q9BSK2 321 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 SFXN3Q9BWM7 321 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 GABARAPL3Q9BY60 117 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ABCG5Q9H222 651 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 HIPK2Q9H2X6 1198 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 RERGLQ9H628 205 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 MED20Q9H944 212 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 LPAR2Q9HBW0 351 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 GPN1Q9HCN4 374 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 DNAJC4Q9NNZ3 241 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 FAM212BQ9NTI7 297 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 NDUFB11Q9NX14 153 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 CLEC5AQ9NY25 188 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 PITPNC1Q9UKF7 332 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 RNF150Q9ULK6 438 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 SLC22A13Q9Y226 551 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 SIGLEC7Q9Y286 467 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 TIMM10BQ9Y5J6 103 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 IER3IP1Q9Y5U9 82 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms