RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ERVK11-1P61568 191 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 DGCR2P98153 550 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 PITPNAQ00169 270 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 SRSF2Q01130 221 aaKnown RBP8.64□□□□□ -1.03
USP39-210ENST00000459775 MICBQ29980 383 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 AKIRIN2Q53H80 203 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 PYDC2Q56P42 97 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 BOD1L2Q8IYS8 172 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 BPIFB2Q8N4F0 458 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 OR52B4Q8NGK2 314 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 SMIM12Q96EX1 92 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 HMG20AQ9NP66 347 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 METRNQ9UJH8 293 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 A0A1B0GW55 424 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 OR7C1O76099 320 aaPredicted RBP8.63□□□□□ -1.03
USP39-210ENST00000459775 CYB5AP00167 134 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 DUX4L2P0CJ85 424 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 DUX4L3P0CJ86 424 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 DUX4L4P0CJ87 422 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 DUX4L5P0CJ88 424 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 DUX4L6P0CJ89 424 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 DUX4L7P0CJ90 424 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 TRAPPC2P0DI81 140 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 TRAPPC2BP0DI82 140 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 RBM11P57052 281 aaKnown RBP8.63□□□□□ -1.03
USP39-210ENST00000459775 TAS2R20P59543 309 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 TLE4Q04727 773 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 ZNF846Q147U1 533 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 AGAP6Q5VW22 663 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 DUX4L9Q6RFH8 374 aaPredicted RBP8.63□□□□□ -1.03
USP39-210ENST00000459775 OR2W3Q7Z3T1 314 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 C5orf24Q7Z6I8 188 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 PEG10Q86TG7 708 aaKnown RBP8.63□□□□□ -1.03
USP39-210ENST00000459775 ZSCAN4Q8NAM6 433 aaPredicted RBP8.63□□□□□ -1.03
USP39-210ENST00000459775 CPNE2Q96FN4 548 aaPredicted RBP8.63□□□□□ -1.03
USP39-210ENST00000459775 HDHD3Q9BSH5 251 aaPredicted RBP8.63□□□□□ -1.03
USP39-210ENST00000459775 FAAP24Q9BTP7 215 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 CHRDL1Q9BU40 450 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 OR2S2Q9NQN1 319 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 DUX4Q9UBX2 424 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 LPAR3Q9UBY5 353 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 NOP16Q9Y3C1 178 aaKnown RBP8.63□□□□□ -1.03
USP39-210ENST00000459775 F8P00451 2351 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 VPS13CQ709C8 3753 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 UBE2QL1A1L167 161 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 SIRPB1O00241 398 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 XRCC3O43542 346 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 METTL15P1P0C7V9 234 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 UBBP0CG47 229 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 RAB6AP20340 208 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 ETV6P41212 452 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 FGF12P61328 243 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 ATAD3CQ5T2N8 411 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 DTX2Q86UW9 622 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 SAXO1Q8IYX7 474 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 POC1AQ8NBT0 407 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 OR10R2Q8NGX6 335 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 OR6F1Q8NGZ6 308 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 NUDCD2Q8WVJ2 157 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 RDH5Q92781 318 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 IL36GQ9NZH8 169 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 GHRLQ9UBU3 117 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 FBLN5Q9UBX5 448 aa8.63□□□□□ -1.03
USP39-210ENST00000459775 CSMD1Q96PZ7 3565 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 FOXI3A8MTJ6 420 aaPredicted RBP8.62□□□□□ -1.03
USP39-210ENST00000459775 CD55P08174 381 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 ADH4P08319 380 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 ANXA7P20073 488 aaKnown RBP8.62□□□□□ -1.03
USP39-210ENST00000459775 FGL1Q08830 312 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 HAGHQ16775 308 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 COX19Q49B96 90 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 ZNF562Q6V9R5 426 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 ZNF546Q86UE3 836 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 FGFRL1Q8N441 504 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 UXS1Q8NBZ7 420 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 OR10W1Q8NGF6 305 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 OR52I2Q8NH67 350 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 RAB40AQ8WXH6 277 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 RAB3CQ96E17 227 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 SULT4A1Q9BR01 284 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 POLDIP2Q9Y2S7 368 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 PDZD2O15018 2839 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 TRAV39A0A0B4J263 110 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 KRBOX1C9JBD0 128 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 LHBP01229 141 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 CD99P14209 185 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 HOXB4P17483 251 aaPredicted RBP8.62□□□□□ -1.03
USP39-210ENST00000459775 AMY2BP19961 511 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 S100A11P31949 105 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 SSBP2P81877 361 aaPredicted RBP8.62□□□□□ -1.03
USP39-210ENST00000459775 ZNF260Q3ZCT1 412 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 TRIQKQ629K1 86 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 ACP7Q6ZNF0 438 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 Q6ZTK2 550 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 C12orf45Q8N5I9 185 aaPredicted RBP8.62□□□□□ -1.03
USP39-210ENST00000459775 EIF4E3Q8N5X7 224 aaKnown RBP8.62□□□□□ -1.03
USP39-210ENST00000459775 CD177Q8N6Q3 437 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 PTX4Q96A99 478 aa8.62□□□□□ -1.03
USP39-210ENST00000459775 DUX5Q96PT3 197 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms