RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 OR14J1Q9UGF5 321 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 VAX2Q9UIW0 290 aa7.49□□□□□ -1.21
HDAC3-202ENST00000459727 PUS1Q9Y606 427 aaKnown RBP eCLIP7.49□□□□□ -1.21
HDAC3-202ENST00000459727 NCOR2Q9Y618 2525 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 TRAV17A0A0B4J275 112 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 A0A1W2PPH5 198 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 A6NLC8 198 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 KIAA1324LA8MWY0 1029 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-202ENST00000459727 PRR33A8MZF0 331 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 C17orf112F2Z3M2 114 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 AP4M1O00189 453 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 SIRPB1O00241 398 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 GPR37O15354 613 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 TNFSF12O43508 249 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 ADH4P08319 380 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF806P0C7X5 589 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 PTPRZ1P23471 2315 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-202ENST00000459727 TNFSF10P50591 281 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 IDH3GP51553 393 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-202ENST00000459727 FOXG1P55316 489 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-202ENST00000459727 RPS23P62266 143 aaKnown RBP7.48□□□□□ -1.21
HDAC3-202ENST00000459727 ICAM4Q14773 271 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 LPAL2Q16609 132 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 HEPN1Q6WQI6 88 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF429Q86V71 674 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 THNSL2Q86YJ6 484 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 DRAM1Q8N682 238 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF525Q8N782 197 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 MUCL1Q96DR8 90 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 BTF3L4Q96K17 158 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 MRPL37Q9BZE1 423 aaKnown RBP7.48□□□□□ -1.21
HDAC3-202ENST00000459727 WDR61Q9GZS3 305 aaKnown RBP7.48□□□□□ -1.21
HDAC3-202ENST00000459727 SMOC1Q9H4F8 434 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 MANBALQ9NQG1 85 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 KCNIP2Q9NS61 270 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-202ENST00000459727 OR1A1Q9P1Q5 309 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 SPRR3Q9UBC9 169 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 HSPB7Q9UBY9 170 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 LIPGQ9Y5X9 500 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 BAHCC1Q9P281 2608 aa7.48□□□□□ -1.21
HDAC3-202ENST00000459727 A0A1B0GWJ7 208 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 CDRT15L2A8MXV6 281 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 C1QTNF9BB2RNN3 333 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 TMEM250H0YL14 139 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 CDX4O14627 284 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-202ENST00000459727 RAB29O14966 203 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 SPINT2O43291 252 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 WDR1O75083 606 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 RHBDL1O75783 438 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 CLDN14O95500 239 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 TMEM50AO95807 157 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 IGKV3-15P01624 115 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 OPN1MWP04001 364 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 OPN1MW2P0DN77 364 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 OPN1MW3P0DN78 364 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 IGHV1-2P23083 117 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 GCH1P30793 250 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 CEACAM6P40199 344 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 KIR2DS2P43631 304 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 GLIPR1P48060 266 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 NOVA1P51513 510 aaKnown RBP7.47□□□□□ -1.21
HDAC3-202ENST00000459727 CD81P60033 236 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 HTD2P86397 168 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 TNFRSF9Q07011 255 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 SLC38A11Q08AI6 406 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 P2RY6Q15077 328 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 GUSBP1Q15486 140 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 HAGHQ16775 308 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 TMEM30BQ3MIR4 351 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 C3orf36Q3SXR2 165 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF718Q3SXZ3 478 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 MBNL2Q5VZF2 373 aaKnown RBP7.47□□□□□ -1.21
HDAC3-202ENST00000459727 TMEM14EPQ6UXP3 125 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 C20orf204Q6ZNR8 217 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 C1orf87Q8N0U7 546 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 BATF2Q8N1L9 274 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF709Q8N972 641 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 SLC25A40Q8TBP6 338 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 C2CD4CQ8TF44 421 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 RAB39BQ96DA2 213 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF488Q96MN9 340 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 HS3ST6Q96QI5 342 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 AGMATQ9BSE5 352 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 OR2J1Q9GZK6 312 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 DEFB127Q9H1M4 99 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 TMPRSS5Q9H3S3 457 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 CRIM1Q9NZV1 1036 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 IL17BQ9UHF5 180 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 PPP1R3CQ9UQK1 317 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 FAM186AA6NE01 2351 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 TPRP12270 2363 aaKnown RBP7.47□□□□□ -1.21
HDAC3-202ENST00000459727 PCSK5Q92824 1860 aa7.47□□□□□ -1.21
HDAC3-202ENST00000459727 PKD1L2Q7Z442 2459 aa7.46□□□□□ -1.21
HDAC3-202ENST00000459727 ELOA3CA0A087WX78 387 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-202ENST00000459727 ARGFXA6NJG6 315 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 LRRC30A6NM36 301 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 AHRRA9YTQ3 701 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 CLDN34H7C241 214 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 MPDU1O75352 247 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms