RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 OR5AL1P0C617 328 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 RFPL3SP0C7P2 107 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 GKN3PP0CG01 181 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 SELEP16581 610 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 RPL7P18124 248 aaKnown RBP4.49□□□□□ -1.69
VPS41-209ENST00000457055 GABRA3P34903 492 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 TSFMP43897 325 aaKnown RBP4.49□□□□□ -1.69
VPS41-209ENST00000457055 FBXW4P57775 412 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 OR12D2P58182 307 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 PPP1CBP62140 327 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 LCN6P62502 163 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 LTBQ06643 244 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 HSD52Q0P140 79 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 ZNF266Q14584 549 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 UBE2V2Q15819 145 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 NRF1Q16656 503 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 GLT8D1Q68CQ7 371 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 C8orf82Q6P1X6 216 aaPredicted RBP4.49□□□□□ -1.69
VPS41-209ENST00000457055 COX8CQ7Z4L0 72 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 C17orf64Q86WR6 236 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 OOSP2Q86WS3 158 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 SFTPA2Q8IWL1 248 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 MMGT1Q8N4V1 131 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 COX18Q8N8Q8 333 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 PRR26Q8N8Z3 221 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 ACVR1CQ8NER5 493 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 OR7A2PQ8NGA2 310 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 FBXO25Q8TCJ0 367 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 RXFP2Q8WXD0 754 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 PNPLA2Q96AD5 504 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 ACY3Q96HD9 319 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 PGLYRP3Q96LB9 341 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 LINC00477Q96M19 166 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 FAM173AQ9BQD7 235 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 DCTN5Q9BTE1 182 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 C1QTNF4Q9BXJ3 329 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 SAMD10Q9BYL1 202 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 CWH43Q9H720 699 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 SDR39U1Q9NRG7 319 aaPredicted RBP4.49□□□□□ -1.69
VPS41-209ENST00000457055 ASIC5Q9NY37 505 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 KLF12Q9Y4X4 402 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 OARD1Q9Y530 152 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 DMDP11532 3685 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 MYH4Q9Y623 1939 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 UNC79Q9P2D8 2635 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 DNAH14Q0VDD8 3507 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 ANKRD11Q6UB99 2663 aaPredicted RBP4.48□□□□□ -1.69
VPS41-209ENST00000457055 OR5B21A6NL26 309 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 LYRM9A8MSI8 78 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 C9JAW5 83 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 G3V2L1 256 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 M0R1B8 84 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 ARPC2O15144 300 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 CRLF1O75462 422 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 DHRS3O75911 302 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 JTBO76095 146 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 ZNF432O94892 652 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 YIF1AO95070 293 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 NDUFB4O95168 129 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 TTRP02766 147 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 MAS1P04201 325 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 OR4Q2P0C623 313 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 OR5G3P0C626 314 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 FAM157CP0CG43 387 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 AKAIN1P0CW23 69 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 BCKDHAP12694 445 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 HOXB6P17509 224 aaKnown RBP4.48□□□□□ -1.69
VPS41-209ENST00000457055 RPS3P23396 243 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS41-209ENST00000457055 PRTN3P24158 256 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 BLVRBP30043 206 aaPredicted RBP4.48□□□□□ -1.69
VPS41-209ENST00000457055 MIPP30301 263 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 AKR1C2P52895 323 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 CTBP2P56545 445 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 SUMO2P61956 95 aaKnown RBP4.48□□□□□ -1.69
VPS41-209ENST00000457055 SP4Q02446 784 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 NECTIN1Q15223 517 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 TEDDM1Q5T9Z0 273 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 ASPHD1Q5U4P2 390 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 IL34Q6ZMJ4 242 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 Q6ZRG5 221 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 Q6ZSR6 202 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 HSD11B1LQ7Z5J1 315 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 C5orf24Q7Z6I8 188 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 SLC35E3Q7Z769 313 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 MRPL55Q7Z7F7 128 aaKnown RBP4.48□□□□□ -1.69
VPS41-209ENST00000457055 SLC47A2Q86VL8 602 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 PPP1R27Q86WC6 154 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 LINC01561Q8N1V8 128 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 FER1L6-AS1Q8NA97 138 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 KLHDC9Q8NEP7 349 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 OR2T12Q8NG77 320 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 TMEM174Q8WUU8 243 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 GMPPAQ96IJ6 420 aaPredicted RBP4.48□□□□□ -1.69
VPS41-209ENST00000457055 TBX15Q96SF7 602 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 TMEM121Q9BTD3 319 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 CXXC4Q9H2H0 198 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 CXorf21Q9HAI6 301 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 HIGD1AQ9Y241 93 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 PKIGQ9Y2B9 76 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 HS3ST3B1Q9Y662 390 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms