RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TRBV6-6A0A0A6YYG2 114 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 RRP9O43818 475 aaKnown RBP14.12□□□□□ -0.15
MSH6-207ENST00000456246 DUS4LO95620 317 aaKnown RBP14.12□□□□□ -0.15
MSH6-207ENST00000456246 CALRP27797 417 aaKnown RBP14.12□□□□□ -0.15
MSH6-207ENST00000456246 PPP1CCP36873 323 aaKnown RBP14.12□□□□□ -0.15
MSH6-207ENST00000456246 GPR12P47775 334 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 LSAMPQ13449 338 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 GNMTQ14749 295 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 FAM71F2Q6NXP2 309 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 ZNF880Q6PDB4 577 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 C10orf99Q6UWK7 81 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 STPG2Q8N412 459 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 OR2AK2Q8NG84 335 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 OR52L2PQ8NGH6 319 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 NICN1Q9BSH3 213 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 LPAR5Q9H1C0 372 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 HSF4Q9ULV5 492 aa14.12□□□□□ -0.15
MSH6-207ENST00000456246 MRPS14O60783 128 aaKnown RBP14.11□□□□□ -0.15
MSH6-207ENST00000456246 RPL23AP62750 156 aaKnown RBP14.11□□□□□ -0.15
MSH6-207ENST00000456246 FABP5Q01469 135 aa14.11□□□□□ -0.15
MSH6-207ENST00000456246 OXLD1Q5BKU9 147 aa14.11□□□□□ -0.15
MSH6-207ENST00000456246 ZNF329Q86UD4 541 aa14.11□□□□□ -0.15
MSH6-207ENST00000456246 FAM89BQ8N5H3 189 aa14.11□□□□□ -0.15
MSH6-207ENST00000456246 RCC1LQ96I51 464 aaKnown RBP14.11□□□□□ -0.15
MSH6-207ENST00000456246 NOL4LQ96MY1 436 aaPredicted RBP14.11□□□□□ -0.15
MSH6-207ENST00000456246 S1PR3Q99500 378 aa14.11□□□□□ -0.15
MSH6-207ENST00000456246 GHITMQ9H3K2 345 aa14.11□□□□□ -0.15
MSH6-207ENST00000456246 NECAP2Q9NVZ3 263 aa14.11□□□□□ -0.15
MSH6-207ENST00000456246 ZNF580Q9UK33 172 aa14.11□□□□□ -0.15
MSH6-207ENST00000456246 AK6Q9Y3D8 172 aaKnown RBP14.11□□□□□ -0.15
MSH6-207ENST00000456246 V9GY05 133 aa14.11□□□□□ -0.15
MSH6-207ENST00000456246 MAP2K4P45985 399 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 GABARAPL2P60520 117 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 P2RY14Q15391 338 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 TEX38Q6PEX7 206 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 FAM71E2Q8N5Q1 922 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 IL1F10Q8WWZ1 152 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 PHF21AQ96BD5 680 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 GFI1Q99684 422 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 GPR61Q9BZJ8 451 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 KCNK15Q9H427 330 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 C12orf4Q9NQ89 552 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 PLSCR3Q9NRY6 295 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 PIPOXQ9P0Z9 390 aa14.1□□□□□ -0.15
MSH6-207ENST00000456246 PRKDCP78527 4128 aaKnown RBP14.1□□□□□ -0.15
MSH6-207ENST00000456246 A0A0A6YYD4 124 aa14.09□□□□□ -0.15
MSH6-207ENST00000456246 ZNF736B4DX44 427 aaPredicted RBP14.09□□□□□ -0.15
MSH6-207ENST00000456246 ITGB1BP1O14713 200 aa14.09□□□□□ -0.15
MSH6-207ENST00000456246 PDCD5O14737 125 aa14.09□□□□□ -0.15
MSH6-207ENST00000456246 OR5H8P0DN80 308 aa14.09□□□□□ -0.15
MSH6-207ENST00000456246 SOX6P35712 828 aa14.09□□□□□ -0.15
MSH6-207ENST00000456246 PNLIPRP3Q17RR3 467 aa14.09□□□□□ -0.15
MSH6-207ENST00000456246 ZNF833PQ6ZTB9 187 aa14.09□□□□□ -0.15
MSH6-207ENST00000456246 OR56B1Q8NGI3 324 aa14.09□□□□□ -0.15
MSH6-207ENST00000456246 SETD6Q8TBK2 473 aa14.09□□□□□ -0.15
MSH6-207ENST00000456246 FAM3DQ96BQ1 224 aa14.09□□□□□ -0.15
MSH6-207ENST00000456246 TRAV1-2A0A0B4J238 106 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 RAB29O14966 203 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 SOCS1O15524 211 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 GALP22466 123 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 MYL9P24844 172 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 MMDQ15546 238 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 ODF3L1Q8IXM7 274 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 EDARADDQ8WWZ3 215 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 CYYR1Q96J86 154 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 NABP2Q9BQ15 211 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 CHCHD6Q9BRQ6 235 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 MRPL20Q9BYC9 149 aaKnown RBP14.08□□□□□ -0.16
MSH6-207ENST00000456246 IFI27L2Q9H2X8 130 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 Q9H521 79 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 NDUFB11Q9NX14 153 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 SLC23A1Q9UHI7 598 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 AK3Q9UIJ7 227 aa14.08□□□□□ -0.16
MSH6-207ENST00000456246 SAA2-SAA4A0A096LPE2 208 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 FOXI3A8MTJ6 420 aaPredicted RBP14.07□□□□□ -0.16
MSH6-207ENST00000456246 NUDT19A8MXV4 375 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 ATP6V1G2O95670 118 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 ELANEP08246 267 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 SAA2P0DJI9 122 aaPredicted RBP14.07□□□□□ -0.16
MSH6-207ENST00000456246 VDAC1P21796 283 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 ZBTB25P24278 435 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 HLA-DRB3P79483 266 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 SSX1Q16384 188 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 CXorf66Q5JRM2 361 aaPredicted RBP14.07□□□□□ -0.16
MSH6-207ENST00000456246 CD200R1LQ6Q8B3 271 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 ZNF251Q9BRH9 671 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 LINC00527Q9UJ94 153 aa14.07□□□□□ -0.16
MSH6-207ENST00000456246 DENRO43583 198 aaKnown RBP14.06□□□□□ -0.16
MSH6-207ENST00000456246 IGF1P05019 195 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 IGLL1P15814 213 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 MYCNOSP40205 109 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 VEGFCP49767 419 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 F2RL1P55085 397 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 ACTBP60709 375 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 MRPS15P82914 257 aaKnown RBP14.06□□□□□ -0.16
MSH6-207ENST00000456246 FOXE3Q13461 319 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 C2orf76Q3KRA6 126 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 ZNF695Q8IW36 515 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 LINC00482Q8N8I6 264 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 KLHL30-AS1Q8NEE0 82 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms