RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 IGKV1-6A0A0C4DH72 117 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 LANCL1O43813 399 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 RGS11O94810 467 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 DIRAS3O95661 229 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 GNB3P16520 340 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 KRTAP10-3P60369 221 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 EBI3Q14213 229 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 HERPUD1Q15011 391 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 ARL6IP1Q15041 203 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 SRSF7Q16629 238 aaKnown RBP eCLIP11.33□□□□□ -0.6
HDAC4-205ENST00000454542 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 ANKRD13BQ86YJ7 626 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 DRAM1Q8N682 238 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 OR56B4Q8NH76 319 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 RBM14Q96PK6 669 aaKnown RBP11.33□□□□□ -0.6
HDAC4-205ENST00000454542 CITED1Q99966 193 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 TOLLIPQ9H0E2 274 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 SPATA2Q9UM82 520 aa11.33□□□□□ -0.6
HDAC4-205ENST00000454542 CMYA5Q8N3K9 4069 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 A0A0A6YYH2 397 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 A6NJ64 397 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 GAPDHP04406 335 aaKnown RBP11.32□□□□□ -0.6
HDAC4-205ENST00000454542 TFAP2AP05549 437 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 SNRNP70P08621 437 aaKnown RBP11.32□□□□□ -0.6
HDAC4-205ENST00000454542 GSTP1P09211 210 aaKnown RBP11.32□□□□□ -0.6
HDAC4-205ENST00000454542 CD3GP09693 182 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 DTYMKP23919 212 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 CD24P25063 80 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 RPS19P39019 145 aaKnown RBP11.32□□□□□ -0.6
HDAC4-205ENST00000454542 NCS1P62166 190 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 IDNKQ5T6J7 187 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 FAM71F2Q6NXP2 309 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 C11orf88Q6PI97 169 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 Q8N6K4 173 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 SETD6Q8TBK2 473 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 SLC25A46Q96AG3 418 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 SLC25A33Q9BSK2 321 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 PARP12Q9H0J9 701 aaKnown RBP11.32□□□□□ -0.6
HDAC4-205ENST00000454542 ATG5Q9H1Y0 275 aa11.32□□□□□ -0.6
HDAC4-205ENST00000454542 TRDCB7Z8K6 153 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 AMY1AP04745 511 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 AMY2AP04746 511 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 SCTP09683 121 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 LSM3P62310 102 aaKnown RBP11.31□□□□□ -0.6
HDAC4-205ENST00000454542 CTF1Q16619 201 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 ZNF260Q3ZCT1 412 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 ZNF833PQ6ZTB9 187 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 DTX3Q8N9I9 347 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 OR4A4PQ8NGN8 299 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 WIPF2Q8TF74 440 aaPredicted RBP11.31□□□□□ -0.6
HDAC4-205ENST00000454542 AGMATQ9BSE5 352 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 NAA50Q9GZZ1 169 aaKnown RBP11.31□□□□□ -0.6
HDAC4-205ENST00000454542 SERTAD4Q9NUC0 356 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 ELF5Q9UKW6 265 aaPredicted RBP11.31□□□□□ -0.6
HDAC4-205ENST00000454542 MOB4Q9Y3A3 225 aa11.31□□□□□ -0.6
HDAC4-205ENST00000454542 SAA2-SAA4A0A096LPE2 208 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 FABP7O15540 132 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 FAM106CPP0CH98 169 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 SAA2P0DJI9 122 aaPredicted RBP11.3□□□□□ -0.6
HDAC4-205ENST00000454542 CD1BP29016 333 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 REG1BP48304 166 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 LSAMPQ13449 338 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 KIR2DS1Q14954 304 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 PNLIPRP3Q17RR3 467 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 HACD4Q5VWC8 232 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 Q6ZS46 218 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 TGIF2LXQ8IUE1 241 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 LYG1Q8N1E2 194 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 OR2AK2Q8NG84 335 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 OR2T6Q8NHC8 308 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 IL1F10Q8WWZ1 152 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 KCTD12Q96CX2 325 aaKnown RBP11.3□□□□□ -0.6
HDAC4-205ENST00000454542 AKR1E2Q96JD6 320 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 ZNF251Q9BRH9 671 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 ABCG5Q9H222 651 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 SLC23A1Q9UHI7 598 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 SIGLEC9Q9Y336 463 aa11.3□□□□□ -0.6
HDAC4-205ENST00000454542 A0A075B6Q4 140 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 TMEM235A6NFC5 223 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 M0QZK8 103 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 HAX1O00165 279 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 FGF16O43320 207 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 LPLP06858 475 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 ZBTB25P24278 435 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 SERPINB10P48595 397 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 VBP1P61758 197 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 BLCAPP62952 87 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 MRPS15P82914 257 aaKnown RBP11.29□□□□□ -0.6
HDAC4-205ENST00000454542 CDNFQ49AH0 187 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 EDARADDQ8WWZ3 215 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 PRSS22Q9GZN4 317 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 WNT10AQ9GZT5 417 aa11.29□□□□□ -0.6
HDAC4-205ENST00000454542 IGKV1D-8A0A087WSZ0 117 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 TRBV6-7A0A0A0MS04 114 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 SSX5O60225 188 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms