RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SSX5O60225 188 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 CRYBA1P05813 215 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 ZBTB25P24278 435 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 BRS3P32247 399 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 MNDAP41218 407 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 RAB7AP51149 207 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 GNG2P59768 71 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 ZNF816Q0VGE8 651 aaPredicted RBP22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 HERPUD1Q15011 391 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 CCBE1Q6UXH8 406 aaPredicted RBP22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 AP3S1Q92572 193 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 TAF15Q92804 592 aaKnown RBP eCLIP22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 GCDHQ92947 438 aaPredicted RBP22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 ISOC1Q96CN7 298 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 ABHD14AQ9BUJ0 271 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 AUNIPQ9H7T9 357 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 C1RLQ9NZP8 487 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 SLC23A1Q9UHI7 598 aa22.5■■□□□ 1.19
SMARCC1-203ENST00000454240 A0A1W2PPI3 338 aa22.49■■□□□ 1.19
SMARCC1-203ENST00000454240 A6NDX4 124 aa22.49■■□□□ 1.19
SMARCC1-203ENST00000454240 EIF4EP06730 217 aaKnown RBP22.49■■□□□ 1.19
SMARCC1-203ENST00000454240 GSTT2P0CG29 244 aa22.49■■□□□ 1.19
SMARCC1-203ENST00000454240 GSTT2BP0CG30 244 aa22.49■■□□□ 1.19
SMARCC1-203ENST00000454240 IL3RAP26951 378 aa22.49■■□□□ 1.19
SMARCC1-203ENST00000454240 LIAT1Q6ZQX7 453 aa22.49■■□□□ 1.19
SMARCC1-203ENST00000454240 OR8H3Q8N146 312 aa22.49■■□□□ 1.19
SMARCC1-203ENST00000454240 OR1A1Q9P1Q5 309 aa22.49■■□□□ 1.19
SMARCC1-203ENST00000454240 IGKV1D-8A0A087WSZ0 117 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 H3BMQ9 156 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 ITGB1BP1O14713 200 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 HSD17B6O14756 317 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 NOL3O60936 208 aaKnown RBP22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 DIRAS3O95661 229 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 APOA1P02647 267 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 GAPDHP04406 335 aaKnown RBP22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 RELBQ01201 579 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 MZT2AQ6P582 158 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 DYNC2LI1Q8TCX1 351 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 CABLES2Q9BTV7 478 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 PITPNC1Q9UKF7 332 aa22.48■■□□□ 1.19
SMARCC1-203ENST00000454240 FAM90A9PA6NNJ1 464 aa22.47■■□□□ 1.19
SMARCC1-203ENST00000454240 CEACAM6P40199 344 aa22.47■■□□□ 1.19
SMARCC1-203ENST00000454240 COMPP49747 757 aaPredicted RBP22.47■■□□□ 1.19
SMARCC1-203ENST00000454240 IGSF11Q5DX21 431 aa22.47■■□□□ 1.19
SMARCC1-203ENST00000454240 ODF3L1Q8IXM7 274 aa22.47■■□□□ 1.19
SMARCC1-203ENST00000454240 LYG1Q8N1E2 194 aa22.47■■□□□ 1.19
SMARCC1-203ENST00000454240 OR2AK2Q8NG84 335 aa22.47■■□□□ 1.19
SMARCC1-203ENST00000454240 CFHR4Q92496 578 aa22.47■■□□□ 1.19
SMARCC1-203ENST00000454240 ST6GALNAC5Q9BVH7 336 aa22.47■■□□□ 1.19
SMARCC1-203ENST00000454240 TOLLIPQ9H0E2 274 aa22.47■■□□□ 1.19
SMARCC1-203ENST00000454240 TIMM23O14925 209 aa22.46■■□□□ 1.19
SMARCC1-203ENST00000454240 HSPA12AO43301 675 aa22.46■■□□□ 1.19
SMARCC1-203ENST00000454240 HPGDSO60760 199 aa22.46■■□□□ 1.19
SMARCC1-203ENST00000454240 CD24P25063 80 aa22.46■■□□□ 1.19
SMARCC1-203ENST00000454240 SOX6P35712 828 aa22.46■■□□□ 1.19
SMARCC1-203ENST00000454240 TMEM69Q5SWH9 247 aa22.46■■□□□ 1.19
SMARCC1-203ENST00000454240 DTX3Q8N9I9 347 aa22.46■■□□□ 1.19
SMARCC1-203ENST00000454240 RTN4IP1Q8WWV3 396 aaPredicted RBP22.46■■□□□ 1.19
SMARCC1-203ENST00000454240 PARP12Q9H0J9 701 aaKnown RBP22.46■■□□□ 1.19
SMARCC1-203ENST00000454240 RAB18Q9NP72 206 aa22.46■■□□□ 1.19
SMARCC1-203ENST00000454240 TRBV6-7A0A0A0MS04 114 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 IGHV1-3A0A0C4DH29 117 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 CHST1O43916 411 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 NDUFA7O95182 113 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 PTHLHP12272 177 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 ELK1P19419 428 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 REG1BP48304 166 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 TAS2R20P59543 309 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 FOXL1Q12952 345 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 HABP2Q14520 560 aaPredicted RBP22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 DHRS7BQ6IAN0 325 aaPredicted RBP22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 SPATA3Q8NHX4 192 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 AGMATQ9BSE5 352 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 RBM38Q9H0Z9 239 aaKnown RBP22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 IFI27L2Q9H2X8 130 aa22.45■■□□□ 1.18
SMARCC1-203ENST00000454240 TMEM219Q86XT9 240 aa22.44■■□□□ 1.18
SMARCC1-203ENST00000454240 THNSL2Q86YJ6 484 aa22.44■■□□□ 1.18
SMARCC1-203ENST00000454240 DRAM1Q8N682 238 aa22.44■■□□□ 1.18
SMARCC1-203ENST00000454240 EDARADDQ8WWZ3 215 aa22.44■■□□□ 1.18
SMARCC1-203ENST00000454240 C11orf54Q9H0W9 315 aaPredicted RBP22.44■■□□□ 1.18
SMARCC1-203ENST00000454240 CCDC59Q9P031 241 aaKnown RBP22.44■■□□□ 1.18
SMARCC1-203ENST00000454240 BET1O15155 118 aa22.43■■□□□ 1.18
SMARCC1-203ENST00000454240 ST8SIA5O15466 376 aa22.43■■□□□ 1.18
SMARCC1-203ENST00000454240 TXNL1O43396 289 aa22.43■■□□□ 1.18
SMARCC1-203ENST00000454240 LANCL1O43813 399 aa22.43■■□□□ 1.18
SMARCC1-203ENST00000454240 FBLN7Q53RD9 439 aa22.43■■□□□ 1.18
SMARCC1-203ENST00000454240 OR56B4Q8NH76 319 aa22.43■■□□□ 1.18
SMARCC1-203ENST00000454240 OR10J5Q8NHC4 309 aa22.43■■□□□ 1.18
SMARCC1-203ENST00000454240 RDH8Q9NYR8 311 aa22.43■■□□□ 1.18
SMARCC1-203ENST00000454240 HLA-DQB1P01920 261 aa22.42■■□□□ 1.18
SMARCC1-203ENST00000454240 LPLP06858 475 aa22.42■■□□□ 1.18
SMARCC1-203ENST00000454240 RAG2P55895 527 aa22.42■■□□□ 1.18
SMARCC1-203ENST00000454240 AWAT1Q58HT5 328 aa22.42■■□□□ 1.18
SMARCC1-203ENST00000454240 Q6ZSV7 163 aa22.42■■□□□ 1.18
SMARCC1-203ENST00000454240 MOB3BQ86TA1 216 aa22.42■■□□□ 1.18
SMARCC1-203ENST00000454240 TGIF2LXQ8IUE1 241 aa22.42■■□□□ 1.18
SMARCC1-203ENST00000454240 CAPSLQ8WWF8 208 aa22.42■■□□□ 1.18
SMARCC1-203ENST00000454240 GHITMQ9H3K2 345 aa22.42■■□□□ 1.18
SMARCC1-203ENST00000454240 PIPOXQ9P0Z9 390 aa22.42■■□□□ 1.18
SMARCC1-203ENST00000454240 SMIM31A0A1B0GVY4 71 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms