RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 UTF1Q5T230 341 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 SLC25A48Q6ZT89 311 aaKnown RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 OVCH2Q7RTZ1 564 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 TMEM229BQ8NBD8 167 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 EDARADDQ8WWZ3 215 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 TRIM63Q969Q1 353 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 CREB3L1Q96BA8 519 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 OR1A1Q9P1Q5 309 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 ANK3Q12955 4377 aaKnown RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 ZNF736B4DX44 427 aaPredicted RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 TOR1AO14656 332 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 NPFFO15130 113 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 CD74P04233 296 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 CSF1P09603 554 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 CD40LGP29965 261 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 PPP1CCP36873 323 aaKnown RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 ZNF134P52741 427 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 TAS2R19P59542 299 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 PRB3Q04118 309 aaPredicted RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 DYRK1AQ13627 763 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 CDK10Q15131 360 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 HLA-DRB5Q30154 266 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 RNASE12Q5GAN4 147 aaKnown RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 VAX1Q5SQQ9 334 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 MINOS1Q5TGZ0 78 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 FAM53AQ6NSI3 398 aaPredicted RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 H1FOOQ8IZA3 346 aaPredicted RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 OR10V1Q8NGI7 309 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 OR4P4Q8NGL7 312 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 OR5H2Q8NGV7 314 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 DEDD2Q8WXF8 326 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 SDHCQ99643 169 aaPredicted RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 GINS4Q9BRT9 223 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 WDR12Q9GZL7 423 aaKnown RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 MMP28Q9H239 520 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 GHITMQ9H3K2 345 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 RDH8Q9NYR8 311 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 TBL2Q9Y4P3 447 aaKnown RBP9.42□□□□□ -0.9
SCN9A-204ENST00000452182 MINOS1-NBL1R4GNA1 71 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 HIVEP2P31629 2446 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 ANKRD20A5PA0PJZ0 165 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 FAM172BPA6NC97 362 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 LANCL1O43813 399 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 TUSC2O75896 110 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 ARG1P05089 322 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 FCER2P06734 321 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 OR5H8P0DN80 308 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 HLA-DMAP28067 261 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 HRH1P35367 487 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 OR3A3P47888 321 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 RAB7AP51149 207 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 PPP5CP53041 499 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 LSAMPQ13449 338 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 CT45A1Q5HYN5 189 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 DHRS11Q6UWP2 260 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 PDZD9Q8IXQ8 264 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 OR2AK2Q8NG84 335 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 CT45A3Q8NHU0 189 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 GIMAP1Q8WWP7 306 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 LEAP2Q969E1 77 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 AGMATQ9BSE5 352 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 ABHD14AQ9BUJ0 271 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 CCDC32Q9BV29 185 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 BEX2Q9BXY8 128 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 ZNF69Q9UC07 566 aa9.41□□□□□ -0.9
SCN9A-204ENST00000452182 INAFM1C9JVW0 142 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 BUB1B-PAK6H3BSN5 160 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 IGHV3-7P01780 117 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 CD3DP04234 171 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 HTR1DP28221 377 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 SAA4P35542 130 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 RFX2P48378 723 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 GNG10P50151 68 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 ZNF137PP52743 207 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 LGALS4P56470 323 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 SCGB2A2Q13296 93 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 ZNF846Q147U1 533 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 BAK1Q16611 211 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 ZNF660Q6AZW8 331 aaPredicted RBP9.4□□□□□ -0.9
SCN9A-204ENST00000452182 BRD3OSQ6XYD6 125 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 ARRDC1Q8N5I2 433 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 C11orf54Q9H0W9 315 aaPredicted RBP9.4□□□□□ -0.9
SCN9A-204ENST00000452182 EHFQ9NZC4 300 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 OR2W1Q9Y3N9 320 aa9.4□□□□□ -0.9
SCN9A-204ENST00000452182 AMMECR1Q9Y4X0 333 aaPredicted RBP9.4□□□□□ -0.9
SCN9A-204ENST00000452182 NSD1Q96L73 2696 aaPredicted RBP9.4□□□□□ -0.9
SCN9A-204ENST00000452182 MXRA5Q9NR99 2828 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 IGHV3OR16-10A0A075B7F0 116 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 LEUTXA8MZ59 168 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 LY6LH3BQJ8 138 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 SLC31A2O15432 143 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 PMP2P02689 132 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 VAMP1P23763 118 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 SRP14P37108 136 aaKnown RBP9.39□□□□□ -0.91
SCN9A-204ENST00000452182 CEACAM3P40198 252 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 AP3S2P59780 193 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 TAGLNQ01995 201 aaKnown RBP9.39□□□□□ -0.91
SCN9A-204ENST00000452182 MEF2DQ14814 521 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 RNASE10Q5GAN6 216 aaKnown RBP9.39□□□□□ -0.91
SCN9A-204ENST00000452182 RUSC1-AS1Q66K80 236 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms