RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 FAM90A22PA8MWA6 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A12PA8MX19 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A5PA8MXJ8 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A23PA8MXZ1 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 TGOLN2O43493 480 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A15PP0C7V4 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A13PP0C7W8 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A14PP0C7W9 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A24PP0C7X0 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 DEFB109BQ30KR1 87 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 PDZD11Q5EBL8 140 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 VWA1Q6PCB0 445 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FBXW12Q6X9E4 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 LGI3Q8N145 548 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 MRGPRDQ8TDS7 321 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 IL1F10Q8WWZ1 152 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 OR51I2Q9H344 312 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 CCL28Q9NRJ3 127 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 TMEM100Q9NV29 134 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 MPC1Q9Y5U8 109 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 DIDO1Q9BTC0 2240 aaKnown RBP10.25□□□□□ -0.77
COL27A1-202ENST00000451716 NXPH3O95157 252 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 UCP3P55916 312 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 PPP1CBP62140 327 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 TLE4Q04727 773 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 KIAA0141Q14154 515 aaPredicted RBP10.25□□□□□ -0.77
COL27A1-202ENST00000451716 MPV17LQ2QL34 196 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 MST1LQ2TV78 715 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 ZNF664Q8N3J9 261 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 ISOC2Q96AB3 205 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 SEC11CQ9BY50 192 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 UBE2J1Q9Y385 318 aaPredicted RBP10.25□□□□□ -0.77
COL27A1-202ENST00000451716 CADP27708 2225 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 NKX2-6A6NCS4 301 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 AGPAT2O15120 278 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 IFNA17P01571 189 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 PMELP40967 661 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 FGF8P55075 233 aaPredicted RBP10.25□□□□□ -0.77
COL27A1-202ENST00000451716 ODF1Q14990 250 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 CCDC71LQ8N9Z2 235 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 SLC25A40Q8TBP6 338 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 MRPL30Q8TCC3 161 aaKnown RBP10.25□□□□□ -0.77
COL27A1-202ENST00000451716 CLCF1Q9UBD9 225 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 LPAR3Q9UBY5 353 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 FAM96BQ9Y3D0 163 aa10.25□□□□□ -0.77
COL27A1-202ENST00000451716 PUS1Q9Y606 427 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL27A1-202ENST00000451716 SMG1Q96Q15 3661 aaKnown RBP10.25□□□□□ -0.77
COL27A1-202ENST00000451716 OR5B21A6NL26 309 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 TRDCB7Z8K6 153 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 H0YL77 283 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 J3KRW8 73 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 SIRPB1O00241 398 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 CDIPTO14735 213 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 LPAR6P43657 344 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 FOXF2Q12947 444 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 LEMD1Q68G75 181 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 FAM214BQ7L5A3 538 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 CXorf67Q86X51 503 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-202ENST00000451716 LRTM2Q8N967 370 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 OR4A4PQ8NGN8 299 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 VPS25Q9BRG1 176 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 CDH20Q9HBT6 801 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 DLL3Q9NYJ7 618 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 ATP23Q9Y6H3 246 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 GRPP07492 148 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 VAMP2P63027 116 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 C9orf106Q8NAJ2 232 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 SCCPDHQ8NBX0 429 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 OR1J1Q8NGS3 322 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 BOD1Q96IK1 185 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 KIRREL1Q96J84 757 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 MAGT1Q9H0U3 335 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 CSTL1Q9H114 145 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 WFDC1Q9HC57 220 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 DNAJC4Q9NNZ3 241 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 FZR1Q9UM11 496 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 A0A1W2PPH5 198 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 DEGS1O15121 323 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 TUBG1P23258 451 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 TGFBR3Q03167 851 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 IL24Q13007 206 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 PCSK4Q6UW60 755 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 ZNF695Q8IW36 515 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 TMEM222Q9H0R3 208 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 TUBG2Q9NRH3 451 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 RCL1Q9Y2P8 373 aaKnown RBP10.24□□□□□ -0.77
COL27A1-202ENST00000451716 ICE1Q9Y2F5 2266 aa10.24□□□□□ -0.77
COL27A1-202ENST00000451716 HEATR1Q9H583 2144 aaKnown RBP10.23□□□□□ -0.77
COL27A1-202ENST00000451716 E5RGE8 158 aa10.23□□□□□ -0.77
COL27A1-202ENST00000451716 MPV17P39210 176 aa10.23□□□□□ -0.77
COL27A1-202ENST00000451716 CEBPDP49716 269 aaPredicted RBP10.23□□□□□ -0.77
COL27A1-202ENST00000451716 PSG7Q13046 419 aa10.23□□□□□ -0.77
COL27A1-202ENST00000451716 GABRA6Q16445 453 aa10.23□□□□□ -0.77
COL27A1-202ENST00000451716 ARL11Q969Q4 196 aa10.23□□□□□ -0.77
COL27A1-202ENST00000451716 OR1A1Q9P1Q5 309 aa10.23□□□□□ -0.77
COL27A1-202ENST00000451716 NSG2Q9Y328 171 aa10.23□□□□□ -0.77
COL27A1-202ENST00000451716 KIR2DS1A0A191URI9 304 aa10.23□□□□□ -0.77
COL27A1-202ENST00000451716 MED19A0JLT2 244 aaPredicted RBP10.23□□□□□ -0.77
COL27A1-202ENST00000451716 J3QT63 122 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms