RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 SAXO1Q8IYX7 474 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 POM121L2Q96KW2 1035 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 TMPRSS5Q9H3S3 457 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 PRSS50Q9UI38 385 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 RNF150Q9ULK6 438 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 DUXBA0A1W2PPF3 345 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 HMGB3O15347 200 aaKnown RBP10.97□□□□□ -0.65
SHC1-210ENST00000448116 NEURL1O76050 574 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 HSPB1P04792 205 aaKnown RBP10.97□□□□□ -0.65
SHC1-210ENST00000448116 PLA2G5P39877 138 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 CD200P41217 278 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 CLDN18P56856 261 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 CLN3Q13286 438 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 ELOBQ15370 118 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 OR1C1Q15619 314 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 ZNF506Q5JVG8 444 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 Q6ZS49 121 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 OR5P3Q8WZ94 311 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 RBMXL1Q96E39 390 aaKnown RBP10.97□□□□□ -0.65
SHC1-210ENST00000448116 SYNGR2O43760 224 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 TRGC2P03986 189 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 RPS16P62249 146 aaKnown RBP10.97□□□□□ -0.65
SHC1-210ENST00000448116 OR8G2PQ6IF36 304 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 ZNF610Q8N9Z0 462 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 MALSU1Q96EH3 234 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 ABHD14BQ96IU4 210 aa10.97□□□□□ -0.65
SHC1-210ENST00000448116 ZNF703Q9H7S9 590 aaPredicted RBP10.97□□□□□ -0.65
SHC1-210ENST00000448116 CEBPZOSA8MTT3 80 aa10.96□□□□□ -0.65
SHC1-210ENST00000448116 HNF1AP20823 631 aa10.96□□□□□ -0.65
SHC1-210ENST00000448116 MDKP21741 143 aaPredicted RBP10.96□□□□□ -0.65
SHC1-210ENST00000448116 ARR3P36575 388 aa10.96□□□□□ -0.65
SHC1-210ENST00000448116 ARL16Q0P5N6 197 aa10.96□□□□□ -0.65
SHC1-210ENST00000448116 A0A1B0GU03 582 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 SELEP16581 610 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 WNT5AP41221 380 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 RAB40CQ96S21 281 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 TTTY12Q9BZ98 90 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 IGKV3D-15A0A087WSY6 115 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 CLEC18AA5D8T8 446 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 MMP9P14780 707 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 SPNS3Q6ZMD2 512 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 H1FOOQ8IZA3 346 aaPredicted RBP10.96□□□□□ -0.66
SHC1-210ENST00000448116 TMEM251Q8N6I4 163 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 CLEC18CQ8NCF0 446 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 GGACTQ9BVM4 153 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 LINC00470Q9BZP3 86 aa10.96□□□□□ -0.66
SHC1-210ENST00000448116 MED13Q9UHV7 2174 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 KHDC3LQ587J8 217 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 TMEM108Q6UXF1 575 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 DEFB127Q9H1M4 99 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 GAB2Q9UQC2 676 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 IGKV1-39P01597 117 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 IGKV1D-39P04432 117 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 GRPP07492 148 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 CDPF1Q6NVV7 123 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 ZNF295-AS1Q8N0V1 137 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 OR10D4PQ8NGN7 298 aa10.95□□□□□ -0.66
SHC1-210ENST00000448116 CHTOPQ9Y3Y2 248 aaKnown RBP10.95□□□□□ -0.66
SHC1-210ENST00000448116 LOC102723971A0A1B0GUV8 181 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 MT-CO3P00414 261 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 HOXA5P20719 270 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 CEACAM6P40199 344 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 NRN1LQ496H8 165 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 GFI1BQ5VTD9 330 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.94□□□□□ -0.66
SHC1-210ENST00000448116 OR8G5Q8NG78 346 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 IL22RA2Q969J5 263 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 S100PBPQ96BU1 408 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 MRPS18CQ9Y3D5 142 aaKnown RBP10.94□□□□□ -0.66
SHC1-210ENST00000448116 MED12LQ86YW9 2145 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 CLDN1O95832 211 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 GLIPR1P48060 266 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 NKX6-1P78426 367 aaPredicted RBP10.94□□□□□ -0.66
SHC1-210ENST00000448116 SRSF7Q16629 238 aaKnown RBP eCLIP10.94□□□□□ -0.66
SHC1-210ENST00000448116 ZNF808Q8N4W9 903 aaPredicted RBP10.94□□□□□ -0.66
SHC1-210ENST00000448116 YPEL4Q96NS1 127 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 DOCK11Q5JSL3 2073 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 UBE2L5PA0A1B0GUS4 154 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 CDIPTO14735 213 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 PPIHO43447 177 aaKnown RBP10.94□□□□□ -0.66
SHC1-210ENST00000448116 NXPH2O95156 264 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 IGKV1-5P01602 117 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 CEACAM1P13688 526 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 CEBPDP49716 269 aaPredicted RBP10.94□□□□□ -0.66
SHC1-210ENST00000448116 OR8G1Q15617 311 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 ZNF880Q6PDB4 577 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 MDP1Q86V88 176 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 ZNF383Q8NA42 475 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 GAR1Q9NY12 217 aaKnown RBP10.94□□□□□ -0.66
SHC1-210ENST00000448116 ABI3Q9P2A4 366 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 MPC1Q9Y5U8 109 aa10.94□□□□□ -0.66
SHC1-210ENST00000448116 OR5B21A6NL26 309 aa10.93□□□□□ -0.66
SHC1-210ENST00000448116 RBMXL2O75526 392 aaKnown RBP10.93□□□□□ -0.66
SHC1-210ENST00000448116 CLEC12BQ2HXU8 276 aa10.93□□□□□ -0.66
SHC1-210ENST00000448116 SSX7Q7RTT5 188 aa10.93□□□□□ -0.66
SHC1-210ENST00000448116 C1QL4Q86Z23 238 aa10.93□□□□□ -0.66
SHC1-210ENST00000448116 OR4C12Q96R67 309 aa10.93□□□□□ -0.66
SHC1-210ENST00000448116 STRADBQ9C0K7 418 aa10.93□□□□□ -0.66
SHC1-210ENST00000448116 PRO1933Q9H354 126 aa10.93□□□□□ -0.66
SHC1-210ENST00000448116 FOXJ2Q9P0K8 574 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms