RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 RAB37Q96AX2 223 aa16.22■□□□□ 0.19
SHANK3-203ENST00000445220 PEF1Q9UBV8 284 aaKnown RBP16.22■□□□□ 0.19
SHANK3-203ENST00000445220 RPEQ96AT9 228 aa16.22■□□□□ 0.19
SHANK3-203ENST00000445220 PRSS27Q9BQR3 290 aa16.22■□□□□ 0.19
SHANK3-203ENST00000445220 K7ESF4 209 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 HOXA5P20719 270 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 ATRAIDQ6UW56 229 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 LINC00596Q86U02 117 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 SP7Q8TDD2 431 aaPredicted RBP16.21■□□□□ 0.19
SHANK3-203ENST00000445220 AQP3Q92482 292 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 OPN3Q9H1Y3 402 aaPredicted RBP16.21■□□□□ 0.19
SHANK3-203ENST00000445220 H0Y980 276 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 MS4A18H0YCH9 400 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 ZP1P60852 638 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 EFNB1P98172 346 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 MS4A18Q3C1V0 323 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 TTC32Q5I0X7 151 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 C1orf100Q5SVJ3 147 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 ERASQ7Z444 233 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 CXXC4Q9H2H0 198 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 DNAJC4Q9NNZ3 241 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 SCN4AP35499 1836 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 OR10D3Q8NH80 312 aa16.21■□□□□ 0.19
SHANK3-203ENST00000445220 LOC107984156A0A0G2JMH3 177 aa16.21■□□□□ 0.18
SHANK3-203ENST00000445220 M0R3E3 92 aa16.21■□□□□ 0.18
SHANK3-203ENST00000445220 HLA-DRB1P01911 266 aa16.21■□□□□ 0.18
SHANK3-203ENST00000445220 AMY1AP04745 511 aa16.21■□□□□ 0.18
SHANK3-203ENST00000445220 GCSHP23434 173 aa16.21■□□□□ 0.18
SHANK3-203ENST00000445220 HIKESHIQ53FT3 197 aa16.21■□□□□ 0.18
SHANK3-203ENST00000445220 ARL17AQ8IVW1 177 aa16.21■□□□□ 0.18
SHANK3-203ENST00000445220 TAF15Q92804 592 aaKnown RBP eCLIP16.21■□□□□ 0.182e-6■■□□□ 11.9
SHANK3-203ENST00000445220 TRBV9A0A0B4J1U6 114 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 CYR61O00622 381 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 CCL2P13500 99 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 PPP1CAP62136 330 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 ZNF124Q15973 351 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 PMCHL2Q9BQD1 86 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 NPVFQ9HCQ7 196 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 ZDHHC8Q9ULC8 765 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 AREGP15514 252 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 KIR2DL1P43626 348 aaPredicted RBP16.2■□□□□ 0.18
SHANK3-203ENST00000445220 GBGT1Q8N5D6 347 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 PXMP4Q9Y6I8 212 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 GZMHP20718 246 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 FOCADQ5VW36 1801 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 DHRS7CA6NNS2 312 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 GCM2O75603 506 aaPredicted RBP16.2■□□□□ 0.18
SHANK3-203ENST00000445220 TGIF1Q15583 401 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 TGIF2LYQ8IUE0 185 aa16.2■□□□□ 0.18
SHANK3-203ENST00000445220 CELA2BP08218 269 aaPredicted RBP16.19■□□□□ 0.18
SHANK3-203ENST00000445220 BMI1P35226 326 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 RPS11P62280 158 aaKnown RBP eCLIP16.19■□□□□ 0.18
SHANK3-203ENST00000445220 UNQ9370/PRO34162Q6UXP9 181 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 SNRNP40Q96DI7 357 aaKnown RBP16.19■□□□□ 0.18
SHANK3-203ENST00000445220 SF3B5Q9BWJ5 86 aaKnown RBP16.19■□□□□ 0.18
SHANK3-203ENST00000445220 COL4A1P02462 1669 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 TRBV5-7A0A0A0MS05 114 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 J3QT63 122 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 KCNMB2Q9Y691 235 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 KBTBD11O94819 623 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 SRIP30626 198 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 RAC3P60763 192 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 A0A1W2PPV9 198 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 IGHV3-13P01766 116 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 IGHV3-7P01780 117 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 RBM11P57052 281 aaKnown RBP16.19■□□□□ 0.18
SHANK3-203ENST00000445220 PAXXQ9BUH6 204 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 RNF122Q9H9V4 155 aa16.19■□□□□ 0.18
SHANK3-203ENST00000445220 DGAT2L7PQ6IED9 249 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 TMEM45BQ96B21 275 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 SH3BGRL3Q9H299 93 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 ARL6IP6Q8N6S5 226 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 CLEC5AQ9NY25 188 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 PIN1P1O15428 100 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 WNT5AP41221 380 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 TNXAQ16473 311 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 CXorf66Q5JRM2 361 aaPredicted RBP16.18■□□□□ 0.18
SHANK3-203ENST00000445220 DNLZQ5SXM8 178 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 GRAMD2BQ96HH9 432 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 QTRT1Q9BXR0 403 aaKnown RBP16.18■□□□□ 0.18
SHANK3-203ENST00000445220 ZNF506Q5JVG8 444 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 NDUFAF3Q9BU61 184 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 MFRPQ9BY79 579 aa16.18■□□□□ 0.18
SHANK3-203ENST00000445220 LOC389332A0A1B0GUA5 103 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 MUC15Q8N387 334 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 POC1AQ8NBT0 407 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 GUCD1Q96NT3 240 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 C5orf66Q9H5L9 145 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 GRIFINA4D1Z8 144 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 AKIRIN1Q9H9L7 192 aaPredicted RBP16.17■□□□□ 0.18
SHANK3-203ENST00000445220 COX6CP09669 75 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 FHITP49789 147 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 GNB2P62879 340 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 KHDC1LQ5JSQ8 128 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 TMEM136Q6ZRR5 245 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 TUBA4BQ9H853 241 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 TUBGCP6Q96RT7 1819 aa16.17■□□□□ 0.18
SHANK3-203ENST00000445220 C16orf47Q6ZP98 133 aaPredicted RBP16.16■□□□□ 0.18
SHANK3-203ENST00000445220 NIT1Q86X76 327 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 SFTPA1Q8IWL2 248 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms