RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 RNF115Q9Y4L5 304 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 IGHV3-43A0A0B4J1X8 118 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 DEFB108AA8MXU0 73 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 IGHV2-70P01814 119 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 IGHV3-43DP0DP04 118 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 UCP3P55916 312 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 EIF3IQ13347 325 aaKnown RBP11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 DHRS13Q6UX07 377 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 HAPLN4Q86UW8 402 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 GCNT2Q8N0V5 402 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 SCGB1C1Q8TD33 95 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 ABHD5Q8WTS1 349 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 OTOGLQ3ZCN5 2332 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 CDIPTO14735 213 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 RAMP3O60896 148 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 CLDN1O95832 211 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 LMO1P25800 156 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 PLGLB1Q02325 96 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 FOXO1Q12778 655 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 GAMTQ14353 236 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 KHDC3LQ587J8 217 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 ZNF826PQ6ZT77 177 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 LFNGQ8NES3 379 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 RFESDQ8TAC1 157 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 FAM234AQ9H0X4 552 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 RBKSQ9H477 322 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 GAR1Q9NY12 217 aaKnown RBP11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 GAB2Q9UQC2 676 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 ATP23Q9Y6H3 246 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 KMT2EQ8IZD2 1858 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 COL12A1Q99715 3063 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 ZNF318Q5VUA4 2279 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 UCP1P25874 307 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 WNT5AP41221 380 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 NKX6-1P78426 367 aaPredicted RBP11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 HLA-DRB3P79483 266 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 ABLIM2Q6H8Q1 611 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 Q6ZSR3 168 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 TMEM204Q9BSN7 226 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 DLL3Q9NYJ7 618 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 DEGS1O15121 323 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 MT-CO3P00414 261 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 IGKV1-5P01602 117 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 TAS2R30P59541 319 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 CEACAM21Q3KPI0 293 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 FAM210BQ96KR6 192 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 YPEL4Q96NS1 127 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 ELOVL1Q9BW60 279 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 CLN8Q9UBY8 286 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 ABCA1O95477 2261 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 PKDREJQ9NTG1 2253 aa11.13□□□□□ -0.63
SLC48A1-201ENST00000442218 WNT9BO14905 357 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 NEURL1O76050 574 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 IGKV1D-33P01593 117 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 IGKV1-33P01594 117 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 HOXA5P20719 270 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 G6PCP35575 357 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 S100A12P80511 92 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 TLE4Q04727 773 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 CLN3Q13286 438 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 FAM58AQ8N1B3 248 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 RCC1LQ96I51 464 aaKnown RBP11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 OR4C12Q96R67 309 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 CYTIPO60759 359 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 CEACAM6P40199 344 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 C6orf15Q6UXA7 325 aaPredicted RBP11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 STRADBQ9C0K7 418 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 OR2W1Q9Y3N9 320 aa11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 ANKRD11Q6UB99 2663 aaPredicted RBP11.12□□□□□ -0.63
SLC48A1-201ENST00000442218 PPP1R2P9O14990 202 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 HNF1AP20823 631 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 PAX6P26367 422 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 GFRA1P56159 465 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 FAM90A2PQ658T7 463 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 KCNE4Q8WWG9 221 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 MEGF10Q96KG7 1140 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 TMEM9BQ9NQ34 198 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 ASH1LQ9NR48 2969 aaKnown RBP11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 PLCE1Q9P212 2302 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 ANKRD30BLA7E2S9 258 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 SYNGR2O43760 224 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 IDH3GP51553 393 aaPredicted RBP11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 LINC00469Q8N7U9 141 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 OR10V1Q8NGI7 309 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 APH1AQ96BI3 265 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 IL36GQ9NZH8 169 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 ZMAT5Q9UDW3 170 aaKnown RBP11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 KIR2DS1A0A191URI9 304 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 KIR2DS4P43632 304 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 CDX1P47902 265 aaPredicted RBP11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 KIR2DS1Q14954 304 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 MCEMP1Q8IX19 187 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 GNPNAT1Q96EK6 184 aaPredicted RBP11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 CABLES2Q9BTV7 478 aa11.11□□□□□ -0.63
SLC48A1-201ENST00000442218 LOC102723971A0A1B0GUV8 181 aa11.1□□□□□ -0.63
SLC48A1-201ENST00000442218 RNF224P0DH78 156 aa11.1□□□□□ -0.63
SLC48A1-201ENST00000442218 UBE2G2P60604 165 aa11.1□□□□□ -0.63
SLC48A1-201ENST00000442218 SRPXP78539 464 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms