RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 HSPB6O14558 160 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 CSN2P05814 226 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 TPT1P13693 172 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 AKR1C4P17516 323 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 ACKR3P25106 362 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 ZNF92Q03936 586 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 C11orf88Q6PI97 169 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 PRSS57Q6UWY2 283 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 ZNF826PQ6ZT77 177 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 ABHD5Q8WTS1 349 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 RNF141Q8WVD5 230 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 C10orf35Q96D05 121 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 SMR3AQ99954 134 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 LY6G6DO95868 133 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 GYPAP02724 150 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 IGFBP2P18065 325 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 COX7A1P24310 79 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 NFYBP25208 207 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 ARF6P62330 175 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 C21orf62-AS1Q17RA5 79 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 NKAPLQ5M9Q1 402 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 TMED6Q8WW62 240 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 GALNT14Q96FL9 552 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 GSX1Q9H4S2 264 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 SEBOXQ9HB31 216 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 PARP11Q9NR21 331 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 LOC105371242A0A075B767 164 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 OR7C1O76099 320 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 IGHV1-46P01743 117 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 IGHV3-13P01766 116 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 ZNF14P17017 642 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 RBP2P50120 134 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 AKR1C2P52895 323 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 CYCSP99999 105 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 AKR1C1Q04828 323 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 TMEM187Q14656 261 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 FAM201AQ5SY85 155 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 RPL7L1Q6DKI1 246 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 SLC25A26Q70HW3 274 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 SVBPQ8N300 66 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 OR56B1Q8NGI3 324 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 TMEM186Q96B77 213 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 MSI2Q96DH6 328 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 MEGF10Q96KG7 1140 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 CCL13Q99616 98 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 TMEM59Q9BXS4 323 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 IGKV1-12A0A0C4DH73 117 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 DHRS3O75911 302 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 IGKV1D-12P01611 117 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 DANCRP0C864 163 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 PI3P19957 117 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 HES1Q14469 280 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 ATXN7L3Q14CW9 347 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 SNAI3Q3KNW1 292 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 TMEM88Q6PEY1 159 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 C12orf54Q6X4T0 127 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 PRR18Q8N4B5 295 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 C3orf56Q8N813 242 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 UBAC2Q8NBM4 344 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 THAP6Q8TBB0 222 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 RXFP4Q8TDU9 374 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 DCUN1D4Q92564 292 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 ERGIC1Q969X5 290 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 A0A1B0GW64 132 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 CLEC18AA5D8T8 446 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 ZNF98A6NK75 572 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 F5H0A9 414 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 FBXO24O75426 580 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 CTSDP07339 412 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 RAB13P51153 203 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 FAM3AP98173 230 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 RELQ04864 619 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 CLEC18CQ8NCF0 446 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 SGK3Q96BR1 496 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 GINS3Q9BRX5 216 aa6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 SSBP3Q9BWW4 388 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 FGF23Q9GZV9 251 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-208ENST00000442054 SERPINE3A8MV23 424 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 J3QW42 95 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 ANGPTL7O43827 346 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 MSMBP08118 114 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 SPP1P10451 314 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 PRKACAP17612 351 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 DUSP1P28562 367 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 BPIFB3P59826 476 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 GUSBP1Q15486 140 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 EFNB3Q15768 340 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 NARS2Q96I59 477 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 DUX5Q96PT3 197 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 HDHD3Q9BSH5 251 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 RHOFQ9HBH0 211 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 IL36GQ9NZH8 169 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 KCNIP1Q9NZI2 227 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 POMT1Q9Y6A1 747 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 BOD1L1Q8NFC6 3051 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 C5orf52A6NGY3 159 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 ENSAO43768 121 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 IGHV2-5P01817 119 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 CHATP28329 748 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 ETV3LQ6ZN32 361 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms