RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 ARFRP1Q13795 201 aa14.46□□□□□ -0.09
CPSF4-205ENST00000440514 GPR107Q5VW38 600 aa14.46□□□□□ -0.09
CPSF4-205ENST00000440514 STEAP3Q658P3 488 aa14.46□□□□□ -0.09
CPSF4-205ENST00000440514 OR4C13Q8NGP0 309 aa14.46□□□□□ -0.09
CPSF4-205ENST00000440514 ACOT12Q8WYK0 555 aa14.46□□□□□ -0.09
CPSF4-205ENST00000440514 PARP12Q9H0J9 701 aaKnown RBP14.46□□□□□ -0.09
CPSF4-205ENST00000440514 OR1A1Q9P1Q5 309 aa14.46□□□□□ -0.09
CPSF4-205ENST00000440514 SIGLEC9Q9Y336 463 aa14.46□□□□□ -0.09
CPSF4-205ENST00000440514 CLPSL1A2RUU4 121 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 YPEL1O60688 119 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 TSPAN9O75954 239 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 LPLP06858 475 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 SNRNP70P08621 437 aaKnown RBP14.45□□□□□ -0.1
CPSF4-205ENST00000440514 CDNFQ49AH0 187 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 IZUMO1Q8IYV9 350 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 OR8H3Q8N146 312 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 LYG1Q8N1E2 194 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 RAB2BQ8WUD1 216 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 CAPSLQ8WWF8 208 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 ST6GALNAC6Q969X2 333 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 SLC25A46Q96AG3 418 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 CMTM3Q96MX0 182 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 YPEL2Q96QA6 119 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 NPFFR1Q9GZQ6 430 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 C16orf95Q9H693 158 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.45□□□□□ -0.1
CPSF4-205ENST00000440514 DIABLOQ9NR28 239 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 SLC23A1Q9UHI7 598 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 ZNF230Q9UIE0 474 aaPredicted RBP14.45□□□□□ -0.1
CPSF4-205ENST00000440514 SPATA2Q9UM82 520 aa14.45□□□□□ -0.1
CPSF4-205ENST00000440514 IGHV3-72A0A0B4J1Y9 119 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 IGHV1-3A0A0C4DH29 117 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 IGKV1-6A0A0C4DH72 117 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 TMEM235A6NFC5 223 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 TRDCB7Z8K6 153 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 GAPDHP04406 335 aaKnown RBP14.44□□□□□ -0.1
CPSF4-205ENST00000440514 TALDO1P37837 337 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 RORCP51449 518 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 ZNF137PP52743 207 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 HERPUD1Q15011 391 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 CTF1Q16619 201 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 MOB3BQ86TA1 216 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 NUDCD2Q8WVJ2 157 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 RTN4IP1Q8WWV3 396 aaPredicted RBP14.44□□□□□ -0.1
CPSF4-205ENST00000440514 WFDC12Q8WWY7 111 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 SLC25A33Q9BSK2 321 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 ZNF747Q9BV97 191 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 IFI27L2Q9H2X8 130 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 GHITMQ9H3K2 345 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 RANBP3Q9H6Z4 567 aaPredicted RBP14.44□□□□□ -0.1
CPSF4-205ENST00000440514 ZNF702PQ9H963 129 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 RNF114Q9Y508 228 aa14.44□□□□□ -0.1
CPSF4-205ENST00000440514 A0A1B0GUS0 222 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 HAX1O00165 279 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 ST8SIA5O15466 376 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 FABP7O15540 132 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 GSTP1P09211 210 aaKnown RBP14.43□□□□□ -0.1
CPSF4-205ENST00000440514 SOX6P35712 828 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 KIR2DS4P43632 304 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 TMBIM6P55061 237 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 HABP2Q14520 560 aaPredicted RBP14.43□□□□□ -0.1
CPSF4-205ENST00000440514 KIR2DS1Q14954 304 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 SRSF7Q16629 238 aaKnown RBP eCLIP14.43□□□□□ -0.1
CPSF4-205ENST00000440514 ZNF260Q3ZCT1 412 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 ODF3L1Q8IXM7 274 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 OR2AK2Q8NG84 335 aa14.43□□□□□ -0.1
CPSF4-205ENST00000440514 RBMXL1Q96E39 390 aaKnown RBP14.43□□□□□ -0.1
CPSF4-205ENST00000440514 S100A16Q96FQ6 103 aaKnown RBP14.43□□□□□ -0.1
CPSF4-205ENST00000440514 FAM90A9PA6NNJ1 464 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 HSPA12AO43301 675 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 OR2F2O95006 317 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 DIRAS3O95661 229 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 IGKV1D-33P01593 117 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 IGKV1-33P01594 117 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 GSTT2P0CG29 244 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 GSTT2BP0CG30 244 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 PROK1P58294 105 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 SRSF4Q08170 494 aaKnown RBP14.42□□□□□ -0.1
CPSF4-205ENST00000440514 HES1Q14469 280 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 PNLIPRP3Q17RR3 467 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 LY6G6FQ5SQ64 297 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 HACD4Q5VWC8 232 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 MZT2AQ6P582 158 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 TGIF2LXQ8IUE1 241 aa14.42□□□□□ -0.1
CPSF4-205ENST00000440514 TRAV18A0A075B6X5 111 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 IGKV1D-8A0A087WSZ0 117 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 SAA2-SAA4A0A096LPE2 208 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 SSX5O60225 188 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 FAM106CPP0CH98 169 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 SAA2P0DJI9 122 aaPredicted RBP14.41□□□□□ -0.1
CPSF4-205ENST00000440514 TMEM11P17152 192 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 ZBTB25P24278 435 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 OR3A3P47888 321 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 GNG2P59768 71 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 KRTAP10-3P60369 221 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 IGSF11Q5DX21 431 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 UBE2NLQ5JXB2 153 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 Q6ZS46 218 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 C16orf82Q7Z2V1 217 aa14.41□□□□□ -0.1
CPSF4-205ENST00000440514 SAMD12Q8N8I0 201 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms