RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 OR52M1Q8NGK5 317 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 OR10J5Q8NHC4 309 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 DYRK2Q92630 601 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 ERGIC1Q969X5 290 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 SARAFQ96BY9 339 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 SCRT1Q9BWW7 348 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 MS4A7Q9GZW8 240 aaPredicted RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 HRH4Q9H3N8 390 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 CDH20Q9HBT6 801 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 TREM1Q9NP99 234 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 LIN7CQ9NUP9 197 aaKnown RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 COA4Q9NYJ1 87 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 PLA2G3Q9NZ20 509 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 CACFD1Q9UGQ2 172 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 PRSS50Q9UI38 385 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 RNF150Q9ULK6 438 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 KLF2Q9Y5W3 355 aaPredicted RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 LIPGQ9Y5X9 500 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 WSB1Q9Y6I7 421 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 USP9YO00507 2555 aaPredicted RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 ITPR2Q14571 2701 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 MED12LQ86YW9 2145 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 TRAV1-1A0A0B4J248 108 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 FAM221AA4D161 298 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 NKX2-6A6NCS4 301 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 AHRRA9YTQ3 701 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 H7C2Y5 167 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 IFNL4K9M1U5 179 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 KCNAB3O43448 404 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 CEACAM4O75871 244 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 LY86O95711 162 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 SCGB1D2O95969 90 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 IGLV1-44P01699 117 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 RCC1P18754 421 aaPredicted RBP6.28□□□□□ -1.4
COL17A1-204ENST00000433822 KITLGP21583 273 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 CCNOP22674 350 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 RFC3P40938 356 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 UBE2NP61088 152 aaKnown RBP6.28□□□□□ -1.4
COL17A1-204ENST00000433822 PMS2P11Q13670 270 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 TGIF1Q15583 401 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 HFEQ30201 348 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 MIDNQ504T8 468 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 SLC35E4Q6ICL7 350 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 TRAT1Q6PIZ9 186 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 MRPL41Q8IXM3 137 aaKnown RBP6.28□□□□□ -1.4
COL17A1-204ENST00000433822 OR10V1Q8NGI7 309 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 OR11L1Q8NGX0 322 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 NEK7Q8TDX7 302 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 SECTM1Q8WVN6 248 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 BCL2L14Q9BZR8 327 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 EGLN1Q9GZT9 426 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 UNKLQ9H9P5 680 aaKnown RBP6.28□□□□□ -1.4
COL17A1-204ENST00000433822 C19orf12Q9NSK7 152 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 PRELID3BQ9Y3B1 194 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 RNF115Q9Y4L5 304 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 NBASA2RRP1 2371 aa6.28□□□□□ -1.4
COL17A1-204ENST00000433822 IGKV1D-13A0A0B4J2D9 117 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 ARGFXA6NJG6 315 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 FAM74A7A6NL05 159 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 SLC33A1O00400 549 aaPredicted RBP6.27□□□□□ -1.41
COL17A1-204ENST00000433822 ADAM20O43506 726 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 NDUFA2O43678 99 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 PTBP3O95758 552 aaKnown RBP6.27□□□□□ -1.41
COL17A1-204ENST00000433822 F10P00742 488 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 HBE1P02100 147 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 IGKV1-13P0DP09 117 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 IGHV1-2P23083 117 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 CFHR2P36980 270 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 ARHGDIBP52566 201 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 RPL23AP62750 156 aaKnown RBP6.27□□□□□ -1.41
COL17A1-204ENST00000433822 VAMP2P63027 116 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF154Q13106 437 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 P2RY6Q15077 328 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 TSC22D1Q15714 1073 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 RNF212Q495C1 297 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 FAM74A3Q4VXF1 159 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 HIKESHIQ53FT3 197 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 SMUG1Q53HV7 270 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 C9orf135Q5VTT2 229 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 MBNL2Q5VZF2 373 aaKnown RBP6.27□□□□□ -1.41
COL17A1-204ENST00000433822 P4HA3Q7Z4N8 544 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 FAM90A1Q86YD7 464 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 FOXRED2Q8IWF2 684 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.27□□□□□ -1.41
COL17A1-204ENST00000433822 SCCPDHQ8NBX0 429 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 PLPPR1Q8TBJ4 325 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 ATP5SQ99766 215 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 PSMG3Q9BT73 122 aaPredicted RBP6.27□□□□□ -1.41
COL17A1-204ENST00000433822 ADAT1Q9BUB4 502 aaKnown RBP6.27□□□□□ -1.41
COL17A1-204ENST00000433822 NCOR1P1Q9H4R4 102 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 WFDC1Q9HC57 220 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 ASCL3Q9NQ33 180 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 CCL28Q9NRJ3 127 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 PLSCR4Q9NRQ2 329 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 SMCO4Q9NRQ5 59 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 COQ3Q9NZJ6 369 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 TAAR3PQ9P1P4 343 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 KIAA1456Q9P272 454 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 LAMP3Q9UQV4 416 aa6.27□□□□□ -1.41
COL17A1-204ENST00000433822 BOD1L1Q8NFC6 3051 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms