RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 TNFSF4P23510 183 aa13.92□□□□□ -0.18
USHBP1-203ENST00000431146 PPP1CCP36873 323 aaKnown RBP13.92□□□□□ -0.18
USHBP1-203ENST00000431146 DMRTC2Q8IXT2 367 aaPredicted RBP13.92□□□□□ -0.18
USHBP1-203ENST00000431146 ARL11Q969Q4 196 aa13.92□□□□□ -0.18
USHBP1-203ENST00000431146 GSX2Q9BZM3 304 aa13.92□□□□□ -0.18
USHBP1-203ENST00000431146 SHISA9B4DS77 424 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 PET100P0DJ07 73 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 F2RP25116 425 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 ADORA2A-AS1P86434 159 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 ZNF124Q15973 351 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 FAM90A1Q86YD7 464 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 TMEM56Q96MV1 263 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 TMEM56-RWDD3S4R434 201 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 DEFB108AA8MXU0 73 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 DEDDO75618 318 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 CDS2O95674 445 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 ZNF16P17020 682 aaPredicted RBP13.91□□□□□ -0.18
USHBP1-203ENST00000431146 CHRNB4P30926 498 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 EDDM3BP56851 147 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 CLLU1Q5K131 121 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 NCMAPQ5T1S8 102 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 NGBQ9NPG2 151 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 TMED3Q9Y3Q3 217 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 USF3Q68DE3 2245 aa13.91□□□□□ -0.18
USHBP1-203ENST00000431146 C17orf100A8MU93 164 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 E7EQL1 145 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 H0Y980 276 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 PLAUP00749 431 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 UCP1P25874 307 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 RAB14P61106 215 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 TLE1Q04724 770 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 FAM74A1Q5RGS3 127 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 DRAM1Q8N682 238 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 SCARB1Q8WTV0 552 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 SNX22Q96L94 193 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 OR2S2Q9NQN1 319 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 ARFGEF3Q5TH69 2177 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.9□□□□□ -0.18
USHBP1-203ENST00000431146 K7EPK0 472 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 S100GP29377 79 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 NUP62P37198 522 aaPredicted RBP13.9□□□□□ -0.18
USHBP1-203ENST00000431146 UBA52P62987 128 aaKnown RBP13.9□□□□□ -0.18
USHBP1-203ENST00000431146 SRPXP78539 464 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 FAM71E2Q8N5Q1 922 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 OR2D2Q9H210 308 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 COQ3Q9NZJ6 369 aa13.9□□□□□ -0.18
USHBP1-203ENST00000431146 DSCAML1Q8TD84 2053 aa13.9□□□□□ -0.19
USHBP1-203ENST00000431146 ABCA4P78363 2273 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 ODAMA1E959 279 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 F8W036 122 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 K7N7A8 449 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 ADAM20O43506 726 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 NXPH3O95157 252 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 GYPAP02724 150 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 SFTPCP11686 197 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 FLI1Q01543 452 aaPredicted RBP13.89□□□□□ -0.19
USHBP1-203ENST00000431146 SMCO1Q147U7 214 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 CLEC9AQ6UXN8 241 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 SSX8Q7RTT4 187 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 ZNF808Q8N4W9 903 aaPredicted RBP13.89□□□□□ -0.19
USHBP1-203ENST00000431146 NINJ1Q92982 152 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 RBPMSQ93062 196 aaKnown RBP13.89□□□□□ -0.19
USHBP1-203ENST00000431146 LURAP1Q96LR2 239 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 AQP10Q96PS8 301 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 DCHS2Q6V1P9 2916 aa13.89□□□□□ -0.19
USHBP1-203ENST00000431146 C15orf65H3BRN8 121 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 MGST3O14880 152 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 HKR1P10072 659 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 OR5D13Q8NGL4 314 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 FAM222BQ8WU58 562 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 C5orf30Q96GV9 206 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 CCL13Q99616 98 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 HIVEP3Q5T1R4 2406 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 TANC2Q9HCD6 1990 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 TEX46H3BTG2 121 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 IGHV3-7P01780 117 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 OMGP23515 440 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 IZUMO4Q1ZYL8 232 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 FGFRL1Q8N441 504 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 OR4D5Q8NGN0 318 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 RNASE6Q93091 150 aaKnown RBP13.88□□□□□ -0.19
USHBP1-203ENST00000431146 CXorf58Q96LI9 332 aa13.88□□□□□ -0.19
USHBP1-203ENST00000431146 SPTBN1Q01082 2364 aaKnown RBP13.88□□□□□ -0.19
USHBP1-203ENST00000431146 A0A0G2JRQ6 117 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 SERPINE2P07093 398 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 NMBP08949 121 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 IRF2P14316 349 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 EPHA1P21709 976 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 STUMQ69YW2 141 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 FAM216BQ8N7L0 139 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 PPP1R35Q8TAP8 253 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 Q8TCH9 128 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 CA5BP1Q8WTZ4 195 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 SAP30LQ9HAJ7 183 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 CYTL1Q9NRR1 136 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 NDRG3Q9UGV2 375 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 YLPM1P49750 1951 aaKnown RBP13.87□□□□□ -0.19
USHBP1-203ENST00000431146 MED19A0JLT2 244 aaPredicted RBP13.87□□□□□ -0.19
USHBP1-203ENST00000431146 SIAH2O43255 324 aa13.87□□□□□ -0.19
USHBP1-203ENST00000431146 SPINT2O43291 252 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms