RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ATP6V0E1O15342 81 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 BAG2O95816 211 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 IGLV1-40P01703 118 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 UBBP0CG47 229 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 PPP1CCP36873 323 aaKnown RBP11.6□□□□□ -0.55
MSH5-208ENST00000429846 GNMTQ14749 295 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 C6orf141Q5SZD1 244 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 PACRGLQ8N7B6 248 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 ZNF491Q8N8L2 437 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 MRPL30Q8TCC3 161 aaKnown RBP11.6□□□□□ -0.55
MSH5-208ENST00000429846 GALMQ96C23 342 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 MRPL20Q9BYC9 149 aaKnown RBP11.6□□□□□ -0.55
MSH5-208ENST00000429846 KIAA1456Q9P272 454 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 SORL1Q92673 2214 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 STAB2Q8WWQ8 2551 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 IGHV7-81A0A0B4J1V7 117 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 TRAV41A0A0B4J266 112 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 PNMA8CA0A1B0GUJ8 204 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 NDUFA3O95167 84 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 CELP19835 753 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 CHATP28329 748 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 WNT4P56705 351 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 C5orf64Q2M2E5 130 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 NKAPLQ5M9Q1 402 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 ZNF833PQ6ZTB9 187 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 NPBQ8NG41 125 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 OR2AK2Q8NG84 335 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 OR52L2PQ8NGH6 319 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 OR1N2Q8NGR9 330 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 GGHQ92820 318 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 NEDD4LQ96PU5 975 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 NABP2Q9BQ15 211 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 ANKRD60Q9BZ19 345 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 PARP11Q9NR21 331 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 ERGIC3Q9Y282 383 aa11.59□□□□□ -0.55
MSH5-208ENST00000429846 SAA2-SAA4A0A096LPE2 208 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 G3V318 75 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 SAA2P0DJI9 122 aaPredicted RBP11.58□□□□□ -0.56
MSH5-208ENST00000429846 KIAA0141Q14154 515 aaPredicted RBP11.58□□□□□ -0.56
MSH5-208ENST00000429846 HMGN3Q15651 99 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 FAM27D1Q5T7N8 215 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 LIN54Q6MZP7 749 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 DHRSXQ8N5I4 330 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 TCTEX1D1Q8N7M0 179 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 MINDY2Q8NBR6 621 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 FAM46BQ96A09 425 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 KLK15Q9H2R5 256 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 GNB4Q9HAV0 340 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 ABRACLQ9P1F3 81 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 STEAP1Q9UHE8 339 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 WSB1Q9Y6I7 421 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.56
MSH5-208ENST00000429846 C3orf84H3BNL1 204 aa11.57□□□□□ -0.56
MSH5-208ENST00000429846 RAB9AP51151 201 aa11.57□□□□□ -0.56
MSH5-208ENST00000429846 CRIP2P52943 208 aaPredicted RBP11.57□□□□□ -0.56
MSH5-208ENST00000429846 LRRC36Q1X8D7 754 aa11.57□□□□□ -0.56
MSH5-208ENST00000429846 ASPHD1Q5U4P2 390 aa11.57□□□□□ -0.56
MSH5-208ENST00000429846 MOB1BQ7L9L4 216 aa11.57□□□□□ -0.56
MSH5-208ENST00000429846 C8orf59Q8N0T1 100 aaPredicted RBP11.57□□□□□ -0.56
MSH5-208ENST00000429846 RBMXL1Q96E39 390 aaKnown RBP11.57□□□□□ -0.56
MSH5-208ENST00000429846 TMEM59Q9BXS4 323 aa11.57□□□□□ -0.56
MSH5-208ENST00000429846 IFI27L2Q9H2X8 130 aa11.57□□□□□ -0.56
MSH5-208ENST00000429846 ISYNA1Q9NPH2 558 aa11.57□□□□□ -0.56
MSH5-208ENST00000429846 PIPOXQ9P0Z9 390 aa11.57□□□□□ -0.56
MSH5-208ENST00000429846 OR5H14A6NHG9 310 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 EBAG9O00559 213 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 OVOL1O14753 267 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 RAB29O14966 203 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 CNTFRP26992 372 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 BLVRBP30043 206 aaPredicted RBP11.56□□□□□ -0.56
MSH5-208ENST00000429846 GNB1P62873 340 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 GLT8D1Q68CQ7 371 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 ZNF660Q6AZW8 331 aaPredicted RBP11.56□□□□□ -0.56
MSH5-208ENST00000429846 AHSA2Q719I0 299 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 MS4A15Q8N5U1 240 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 SULT4A1Q9BR01 284 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 GHITMQ9H3K2 345 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 PLCXD1Q9NUJ7 323 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 PSORS1C1Q9UIG5 152 aa11.56□□□□□ -0.56
MSH5-208ENST00000429846 RBBP9O75884 186 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 LY86O95711 162 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 OR3A3P47888 321 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 RPS27AP62979 156 aaKnown RBP11.55□□□□□ -0.56
MSH5-208ENST00000429846 ECSCRQ19T08 205 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 C19orf54Q5BKX5 351 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 PYHIN1Q6K0P9 492 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 SVOPQ8N4V2 548 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 NANOGP1Q8N7R0 232 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 KCNG3Q8TAE7 436 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 IL1F10Q8WWZ1 152 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 PHYHIPQ92561 330 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 RITA1Q96K30 269 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 OR5B12Q96R08 314 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 RNF150Q9ULK6 438 aa11.55□□□□□ -0.56
MSH5-208ENST00000429846 A0A1W2PN81 502 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 ITGB1BP1O14713 200 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 RRHO14718 337 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 NAPSAO96009 420 aa11.54□□□□□ -0.56
MSH5-208ENST00000429846 LGALS1P09382 135 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms