RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 SPOCK3Q9BQ16 436 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 SLC39A9Q9NUM3 307 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 A0A1W2PNU3 283 aaPredicted RBP12.75□□□□□ -0.37
CACTIN-203ENST00000429344 SYNGR3O43761 229 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 CLDN1O95832 211 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 FTH1P19P0C7X4 201 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 ZNF766Q5HY98 468 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 GGNQ86UU5 652 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 C14orf144Q96I85 54 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 OPA3Q9H6K4 179 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 PSENENQ9NZ42 101 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 OR14J1Q9UGF5 321 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 SYNGR1O43759 233 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 DDTP30046 118 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 C10orf128Q5T292 105 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 ZNF66Q6ZN08 573 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 HIST3H2BBQ8N257 126 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 TMEM178AQ8NBL3 297 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 SNIP1Q8TAD8 396 aaKnown RBP12.75□□□□□ -0.37
CACTIN-203ENST00000429344 DTD1Q8TEA8 209 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 TMEM54Q969K7 222 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 DMDP11532 3685 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 SP1P08047 785 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 PRDX4Q13162 271 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 OR10J5Q8NHC4 309 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 GPR146Q96CH1 333 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 OR2H1Q9GZK4 316 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 CRIM1Q9NZV1 1036 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 SNRPCP09234 159 aaKnown RBP12.74□□□□□ -0.37
CACTIN-203ENST00000429344 TAS2R30P59541 319 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 RNF151Q2KHN1 245 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 DEFB109BQ30KR1 87 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 MALSU1Q96EH3 234 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 ZNF703Q9H7S9 590 aaPredicted RBP12.74□□□□□ -0.37
CACTIN-203ENST00000429344 DNPH1O43598 174 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 HSPB1P04792 205 aaKnown RBP12.74□□□□□ -0.37
CACTIN-203ENST00000429344 HNF1AP20823 631 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 CTSSP25774 331 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 MRPL41Q8IXM3 137 aaKnown RBP12.74□□□□□ -0.37
CACTIN-203ENST00000429344 OR5B12Q96R08 314 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 WNT5BQ9H1J7 359 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 RBKSQ9H477 322 aa12.74□□□□□ -0.37
CACTIN-203ENST00000429344 TRGV5A0A0B4J1U4 118 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 MAP1LC3B2A6NCE7 125 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 OR6C6A6NF89 314 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 SIRPB1O00241 398 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 CA11O75493 328 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 B3GALT5-AS1P59052 145 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 SRSF6Q13247 344 aaKnown RBP12.73□□□□□ -0.37
CACTIN-203ENST00000429344 ZNF808Q8N4W9 903 aaPredicted RBP12.73□□□□□ -0.37
CACTIN-203ENST00000429344 MAP1LC3BQ9GZQ8 125 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 CHD3Q12873 2000 aaKnown RBP12.73□□□□□ -0.37
CACTIN-203ENST00000429344 PTBP3O95758 552 aaKnown RBP12.73□□□□□ -0.37
CACTIN-203ENST00000429344 HIST1H1BP16401 226 aaKnown RBP12.73□□□□□ -0.37
CACTIN-203ENST00000429344 HOXC12P31275 282 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 PMELP40967 661 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 NCR3LG1Q68D85 454 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 TMEM211Q6ICI0 200 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 SDSLQ96GA7 329 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 Q9N2K0 584 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 ZNF716A6NP11 495 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 DFFBO76075 338 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 EGR1P18146 543 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 APLNRP35414 380 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 ZNF506Q5JVG8 444 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 LRTM2Q8N967 370 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 OR4F5Q8NH21 305 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 PLPPR2Q96GM1 343 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 OR4F4Q96R69 305 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 PRDM13Q9H4Q3 707 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 OR1A1Q9P1Q5 309 aa12.73□□□□□ -0.37
CACTIN-203ENST00000429344 PKDREJQ9NTG1 2253 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 XKRY2A2RUG3 117 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 RPL36A-HNRNPH2H7BZ11 118 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 PGLYRP1O75594 196 aaPredicted RBP12.72□□□□□ -0.37
CACTIN-203ENST00000429344 NGFP01138 241 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 BCL2P10415 239 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 CRYGSP22914 178 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 OTX1P32242 354 aaPredicted RBP12.72□□□□□ -0.37
CACTIN-203ENST00000429344 USF3Q68DE3 2245 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 PRR14LQ5THK1 2151 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 H7BYZ3 331 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 SLC31A2O15432 143 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 CST2P09228 141 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 UBE2NP61088 152 aaKnown RBP12.72□□□□□ -0.37
CACTIN-203ENST00000429344 HERPUD1Q15011 391 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 PLA2G2CQ5R387 149 aa12.72□□□□□ -0.37
CACTIN-203ENST00000429344 CPEB3Q8NE35 698 aaKnown RBP12.72□□□□□ -0.37
CACTIN-203ENST00000429344 ZNF737O75373 536 aa12.71□□□□□ -0.37
CACTIN-203ENST00000429344 KRASP01116 189 aa12.71□□□□□ -0.37
CACTIN-203ENST00000429344 IGLV3-1P01715 115 aa12.71□□□□□ -0.37
CACTIN-203ENST00000429344 IL2RGP31785 369 aa12.71□□□□□ -0.37
CACTIN-203ENST00000429344 CHRNA7P36544 502 aa12.71□□□□□ -0.37
CACTIN-203ENST00000429344 FOXG1P55316 489 aaPredicted RBP12.71□□□□□ -0.37
CACTIN-203ENST00000429344 UCP2P55851 309 aa12.71□□□□□ -0.37
CACTIN-203ENST00000429344 UBE2G2P60604 165 aa12.71□□□□□ -0.37
CACTIN-203ENST00000429344 FOXO1Q12778 655 aa12.71□□□□□ -0.37
CACTIN-203ENST00000429344 OR8G1Q15617 311 aa12.71□□□□□ -0.37
CACTIN-203ENST00000429344 ELOVL1Q9BW60 279 aa12.71□□□□□ -0.37
CACTIN-203ENST00000429344 DECR2Q9NUI1 292 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms