RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 PPP1CCP36873 323 aaKnown RBP22.13■■□□□ 1.13
SH3GL3-202ENST00000427482 EDDM3BP56851 147 aa22.13■■□□□ 1.13
SH3GL3-202ENST00000427482 ESCO2Q56NI9 601 aa22.13■■□□□ 1.13
SH3GL3-202ENST00000427482 ZNF645Q8N7E2 425 aa22.13■■□□□ 1.13
SH3GL3-202ENST00000427482 RFESDQ8TAC1 157 aa22.13■■□□□ 1.13
SH3GL3-202ENST00000427482 RBPMSQ93062 196 aaKnown RBP22.13■■□□□ 1.13
SH3GL3-202ENST00000427482 CCL13Q99616 98 aa22.13■■□□□ 1.13
SH3GL3-202ENST00000427482 LGALS8O00214 317 aa22.12■■□□□ 1.13
SH3GL3-202ENST00000427482 C1orf87Q8N0U7 546 aa22.12■■□□□ 1.13
SH3GL3-202ENST00000427482 OR6C3Q9NZP0 311 aa22.12■■□□□ 1.13
SH3GL3-202ENST00000427482 ANKHD1Q8IWZ3 2542 aaKnown RBP22.12■■□□□ 1.13
SH3GL3-202ENST00000427482 TMEM178BH3BS89 294 aa22.11■■□□□ 1.13
SH3GL3-202ENST00000427482 FOXRED2Q8IWF2 684 aa22.11■■□□□ 1.13
SH3GL3-202ENST00000427482 TMEM204Q9BSN7 226 aa22.11■■□□□ 1.13
SH3GL3-202ENST00000427482 OR2D2Q9H210 308 aa22.11■■□□□ 1.13
SH3GL3-202ENST00000427482 TPRP12270 2363 aaKnown RBP22.11■■□□□ 1.13
SH3GL3-202ENST00000427482 IGHV3-43A0A0B4J1X8 118 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 SIGLEC5O15389 551 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 DEDDO75618 318 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 IGHV3-43DP0DP04 118 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 ZNF672Q499Z4 452 aaPredicted RBP22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 OR8H3Q8N146 312 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 FAM216BQ8N7L0 139 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 ZBTB34Q8NCN2 500 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 OR52M1Q8NGK5 317 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 TMEM106BQ9NUM4 274 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 ARID1AO14497 2285 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 HIVEP3Q5T1R4 2406 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 TRAV38-1A0A0B4J264 116 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 MBPP02686 304 aaPredicted RBP22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 SMCO1Q147U7 214 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 MSMO1Q15800 293 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 SWI5Q1ZZU3 235 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 AQP10Q96PS8 301 aa22.1■■□□□ 1.13
SH3GL3-202ENST00000427482 MSGN1A6NI15 193 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 NKX6-3A6NJ46 265 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 F2RL2O00254 374 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 SCGB1D2O95969 90 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 CGB3P0DN86 165 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 CGB7P0DN87 165 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 VDAC1P21796 283 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 NUP62P37198 522 aaPredicted RBP22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 UBA52P62987 128 aaKnown RBP22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 C4orf17Q53FE4 359 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 NMSQ5H8A3 153 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 OR4D5Q8NGN0 318 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 SPIN2AQ99865 258 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 SPIN2BQ9BPZ2 258 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 LIN7CQ9NUP9 197 aaKnown RBP22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 JPT1Q9UK76 154 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 RNF150Q9ULK6 438 aa22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 LSM5Q9Y4Y9 91 aaKnown RBP22.09■■□□□ 1.13
SH3GL3-202ENST00000427482 PIGBOS1A0A0B4J2F0 54 aa22.08■■□□□ 1.13
SH3GL3-202ENST00000427482 K7EPK0 472 aa22.08■■□□□ 1.13
SH3GL3-202ENST00000427482 RLN2P04090 185 aa22.08■■□□□ 1.13
SH3GL3-202ENST00000427482 FAM71E2Q8N5Q1 922 aa22.08■■□□□ 1.13
SH3GL3-202ENST00000427482 C5orf30Q96GV9 206 aa22.08■■□□□ 1.13
SH3GL3-202ENST00000427482 ARPC5LQ9BPX5 153 aa22.08■■□□□ 1.13
SH3GL3-202ENST00000427482 ZFP57Q9NU63 452 aa22.08■■□□□ 1.13
SH3GL3-202ENST00000427482 PPIAL4EA0A075B759 164 aa22.08■■□□□ 1.12
SH3GL3-202ENST00000427482 RNF212BA8MTL3 300 aa22.08■■□□□ 1.12
SH3GL3-202ENST00000427482 PPIAL4DF5H284 164 aa22.08■■□□□ 1.12
SH3GL3-202ENST00000427482 SERPINE2P07093 398 aa22.08■■□□□ 1.12
SH3GL3-202ENST00000427482 PPIAL4FP0DN26 164 aa22.08■■□□□ 1.12
SH3GL3-202ENST00000427482 UQCRFS1P47985 274 aa22.08■■□□□ 1.12
SH3GL3-202ENST00000427482 MUC15Q8N387 334 aa22.08■■□□□ 1.12
SH3GL3-202ENST00000427482 CCL17Q92583 94 aa22.08■■□□□ 1.12
SH3GL3-202ENST00000427482 CALYQ9NYX4 217 aa22.08■■□□□ 1.12
SH3GL3-202ENST00000427482 PPIAL4AQ9Y536 164 aa22.08■■□□□ 1.12
SH3GL3-202ENST00000427482 CLEC18AA5D8T8 446 aa22.07■■□□□ 1.12
SH3GL3-202ENST00000427482 SPDEFO95238 335 aa22.07■■□□□ 1.12
SH3GL3-202ENST00000427482 GNLYP22749 145 aa22.07■■□□□ 1.12
SH3GL3-202ENST00000427482 EIF4EBP1Q13541 118 aaPredicted RBP22.07■■□□□ 1.12
SH3GL3-202ENST00000427482 ZNF808Q8N4W9 903 aaPredicted RBP22.07■■□□□ 1.12
SH3GL3-202ENST00000427482 CLEC18CQ8NCF0 446 aa22.07■■□□□ 1.12
SH3GL3-202ENST00000427482 PLEKHF2Q9H8W4 249 aa22.07■■□□□ 1.12
SH3GL3-202ENST00000427482 KALRNO60229 2985 aa22.07■■□□□ 1.12
SH3GL3-202ENST00000427482 RPS10-NUDT3A0A1W2PQS6 291 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 ADAM20O43506 726 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 LTC4SQ16873 150 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 GALNT11Q8NCW6 608 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 ST8SIA2Q92186 375 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 RAB9BQ9NP90 201 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 LOXL3P58215 753 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 C17orf58Q2M2W7 97 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 SCARB1Q8WTV0 552 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 FAM216AQ8WUB2 273 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 EDARADDQ8WWZ3 215 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 GNG12Q9UBI6 72 aa22.06■■□□□ 1.12
SH3GL3-202ENST00000427482 TRGV10A0A0A0MS01 117 aa22.05■■□□□ 1.12
SH3GL3-202ENST00000427482 TMPRSS2O15393 492 aa22.05■■□□□ 1.12
SH3GL3-202ENST00000427482 YPEL1O60688 119 aa22.05■■□□□ 1.12
SH3GL3-202ENST00000427482 ZNF16P17020 682 aaPredicted RBP22.05■■□□□ 1.12
SH3GL3-202ENST00000427482 MORN2Q502X0 79 aa22.05■■□□□ 1.12
SH3GL3-202ENST00000427482 CLLU1Q5K131 121 aa22.05■■□□□ 1.12
SH3GL3-202ENST00000427482 ALKAL2Q6UX46 152 aa22.05■■□□□ 1.12
SH3GL3-202ENST00000427482 TCF23Q7RTU1 214 aa22.05■■□□□ 1.12
SH3GL3-202ENST00000427482 YPEL2Q96QA6 119 aa22.05■■□□□ 1.12
SH3GL3-202ENST00000427482 ZNF471Q9BX82 626 aaPredicted RBP22.05■■□□□ 1.12
SH3GL3-202ENST00000427482 ST8SIA3O43173 380 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms