RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ARR3P36575 388 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 CDX1P47902 265 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-205ENST00000425443 UBE2G2P60604 165 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 ARG2P78540 354 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 HES3Q5TGS1 186 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 SPSB4Q96A44 273 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 REPIN1Q9BWE0 567 aaKnown RBP11.09□□□□□ -0.63
COL12A1-205ENST00000425443 TTC28Q96AY4 2481 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 C3orf85A0A1B0GTC6 90 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 ANKRD30BLA7E2S9 258 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 ZNF727A8MUV8 499 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 TMEM50AO95807 157 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 TK1P04183 234 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-205ENST00000425443 TBC1D26Q86UD7 250 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 GAPTQ8N292 157 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 OR5T1Q8NG75 326 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 FGF23Q9GZV9 251 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-205ENST00000425443 ADAM20O43506 726 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 HOXA5P20719 270 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 RPS10P46783 165 aaKnown RBP11.08□□□□□ -0.64
COL12A1-205ENST00000425443 RPS23P62266 143 aaKnown RBP11.08□□□□□ -0.64
COL12A1-205ENST00000425443 RUNX1Q01196 453 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 RNPS1Q15287 305 aaKnown RBP11.08□□□□□ -0.64
COL12A1-205ENST00000425443 FBXW9Q5XUX1 488 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 SSX7Q7RTT5 188 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 NUFIP2Q7Z417 695 aaKnown RBP11.08□□□□□ -0.64
COL12A1-205ENST00000425443 OR1L6Q8NGR2 347 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 YPEL4Q96NS1 127 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 RNF2Q99496 336 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF674Q2M3X9 581 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 CEACAM21Q3KPI0 293 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 ATP1A1-AS1Q5TC04 95 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 SPSB3Q6PJ21 355 aa11.08□□□□□ -0.64
COL12A1-205ENST00000425443 SPENQ96T58 3664 aaKnown RBP11.08□□□□□ -0.64
COL12A1-205ENST00000425443 GTF3C1Q12789 2109 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 IGKV1D-13A0A0B4J2D9 117 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF503-AS2A6NEH8 195 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 RPL36A-HNRNPH2H7BZ11 118 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 MPPED1O15442 326 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 IGKV1-13P0DP09 117 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 ATP6V0CP27449 155 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 NKX2-1P43699 371 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-205ENST00000425443 HIKESHIQ53FT3 197 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 LEMD1Q68G75 181 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF818PQ6ZRF7 136 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 COLCA1Q6ZS62 124 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 SLC35B3Q9H1N7 401 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 GSX1Q9H4S2 264 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-205ENST00000425443 PRSS50Q9UI38 385 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 PCSK5Q92824 1860 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 CD300LBA8K4G0 201 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 PROB1E7EW31 1015 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 CDX4O14627 284 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-205ENST00000425443 SYNGR1O43759 233 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 VAMP2P63027 116 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 IL13RA2Q14627 380 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 C4orf17Q53FE4 359 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 GPR157Q5UAW9 335 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 OR2G3Q8NGZ4 309 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF596Q8TC21 504 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF552Q9H707 407 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF430Q9H8G1 570 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-205ENST00000425443 CCL28Q9NRJ3 127 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 A0A1W2PR80 420 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 MKRN2OSH3BPM6 223 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 AQP7O14520 342 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 PLA2G5P39877 138 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 TLE1Q04724 770 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 HERPUD1Q15011 391 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 ZNF343Q6P1L6 599 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 TUBA4BQ9H853 241 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 KCNJ16Q9NPI9 418 aa11.07□□□□□ -0.64
COL12A1-205ENST00000425443 SPTBN2O15020 2390 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 J3KRW8 73 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 M0QZ24 198 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 LILRA1O75019 489 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 MDKP21741 143 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-205ENST00000425443 OR3A1P47881 315 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
COL12A1-205ENST00000425443 FGF12P61328 243 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 HMGN3Q15651 99 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 OR2C3Q8N628 320 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 OR5C1Q8NGR4 320 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 PCNX2A6NKB5 2137 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 GZMHP20718 246 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 CEACAM6P40199 344 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 TFPI2P48307 235 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 TLE4Q04727 773 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 KHDC3LQ587J8 217 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 GCNT2Q8N0V5 402 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 MTCH1Q9NZJ7 389 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 LIPGQ9Y5X9 500 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 CACNA1HO95180 2353 aa11.06□□□□□ -0.64
COL12A1-205ENST00000425443 DOCK11Q5JSL3 2073 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 TRDCB7Z8K6 153 aa11.05□□□□□ -0.64
COL12A1-205ENST00000425443 H0YL77 283 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms