RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 PPIAL4DF5H284 164 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 HSPB6O14558 160 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 CCSO14618 274 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 B3GALNT1O75752 331 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 IGHV2-70P01814 119 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 SCTP09683 121 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 PPIAL4FP0DN26 164 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 IL2RGP31785 369 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 ESCO2Q56NI9 601 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 Q6ZPA2 131 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 CMTM1Q8IZ96 169 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 INO80EQ8NBZ0 244 aaPredicted RBP12.98□□□□□ -0.33
SHOX2-202ENST00000425436 KIRREL1Q96J84 757 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 SLC2A9Q9NRM0 540 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 ZFP57Q9NU63 452 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 KCNIP1Q9NZI2 227 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 UBQLN2Q9UHD9 624 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 TRAPPC2LQ9UL33 140 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 PPIAL4AQ9Y536 164 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 MED13LQ71F56 2210 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 TRBV6-7A0A0A0MS04 114 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 SIRPB1O00241 398 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 GPR31O00270 319 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 BET1O15155 118 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 MPC2O95563 127 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 SLC35E4Q6ICL7 350 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 ACOT7LQ6ZUV0 252 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 LGI3Q8N145 548 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 CLDND2Q8NHS1 167 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 ARL6Q9H0F7 186 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 MBNL3Q9NUK0 354 aaKnown RBP12.98□□□□□ -0.33
SHOX2-202ENST00000425436 TNFSF18Q9UNG2 199 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 TMEM30CPA0ZSE6 113 aa12.97□□□□□ -0.33
SHOX2-202ENST00000425436 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.97□□□□□ -0.33
SHOX2-202ENST00000425436 MPPED1O15442 326 aa12.97□□□□□ -0.33
SHOX2-202ENST00000425436 NUP62P37198 522 aaPredicted RBP12.97□□□□□ -0.33
SHOX2-202ENST00000425436 RAB14P61106 215 aa12.97□□□□□ -0.33
SHOX2-202ENST00000425436 TMEM187Q14656 261 aa12.97□□□□□ -0.33
SHOX2-202ENST00000425436 SLC51BQ86UW2 128 aa12.97□□□□□ -0.33
SHOX2-202ENST00000425436 PPP1R35Q8TAP8 253 aa12.97□□□□□ -0.33
SHOX2-202ENST00000425436 CD99P14209 185 aa12.96□□□□□ -0.33
SHOX2-202ENST00000425436 GNRHRP30968 328 aa12.96□□□□□ -0.33
SHOX2-202ENST00000425436 HTR2BP41595 481 aa12.96□□□□□ -0.33
SHOX2-202ENST00000425436 PAX5Q02548 391 aa12.96□□□□□ -0.33
SHOX2-202ENST00000425436 LOXL1Q08397 574 aaPredicted RBP12.96□□□□□ -0.33
SHOX2-202ENST00000425436 TRAT1Q6PIZ9 186 aa12.96□□□□□ -0.33
SHOX2-202ENST00000425436 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
SHOX2-202ENST00000425436 KCNRGQ8N5I3 272 aa12.96□□□□□ -0.33
SHOX2-202ENST00000425436 TMUB1Q9BVT8 246 aa12.96□□□□□ -0.33
SHOX2-202ENST00000425436 SLC5A7Q9GZV3 580 aa12.96□□□□□ -0.33
SHOX2-202ENST00000425436 OR2W1Q9Y3N9 320 aa12.96□□□□□ -0.33
SHOX2-202ENST00000425436 OOEPA6NGQ2 149 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 SRRM5B3KS81 715 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 LGALS8O00214 317 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 ADAP1O75689 374 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 GYPAP02724 150 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 RLN2P04090 185 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 TFF1P04155 84 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 LYL1P12980 280 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 LMO4P61968 165 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 HERPUD1Q15011 391 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 LYPD2Q6UXB3 125 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 LDLRAD3Q86YD5 345 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 H1FOOQ8IZA3 346 aaPredicted RBP12.95□□□□□ -0.34
SHOX2-202ENST00000425436 AKR1E2Q96JD6 320 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 SMR3AQ99954 134 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 OR14J1Q9UGF5 321 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 TMED3Q9Y3Q3 217 aa12.95□□□□□ -0.34
SHOX2-202ENST00000425436 C3orf85A0A1B0GTC6 90 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 DUXBA0A1W2PPF3 345 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 KANTRA0A1W2PQU2 76 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 HOXB5P09067 269 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 OR5AC1P0C628 307 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 RCC1P18754 421 aaPredicted RBP12.94□□□□□ -0.34
SHOX2-202ENST00000425436 IL15RAQ13261 267 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 HMGN3Q15651 99 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 LRRC37A5PQ49AS3 106 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 PHLDA2Q53GA4 152 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 C6orf183Q5T699 404 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 PRSS54Q6PEW0 395 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 SLC7A5P1Q8MH63 180 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 PLPPR1Q8TBJ4 325 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 SECTM1Q8WVN6 248 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 C18orf12Q96KH6 178 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 ZNF665Q9H7R5 613 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 RDH8Q9NYR8 311 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 DNAJB11Q9UBS4 358 aa12.94□□□□□ -0.34
SHOX2-202ENST00000425436 TRAV38-1A0A0B4J264 116 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 IGKV1-6A0A0C4DH72 117 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 PHF1O43189 567 aaPredicted RBP12.93□□□□□ -0.34
SHOX2-202ENST00000425436 WNT2P09544 360 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 LUMP51884 338 aaPredicted RBP12.93□□□□□ -0.34
SHOX2-202ENST00000425436 SMCO1Q147U7 214 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 IAH1Q2TAA2 248 aaPredicted RBP12.93□□□□□ -0.34
SHOX2-202ENST00000425436 TMEM155Q4W5P6 130 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 TEX36Q5VZQ5 186 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 ARHGAP32A7KAX9 2087 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 FAM157AC9JC47 383 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 HSPA12AO43301 675 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 IGHV2-5P01817 119 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms