RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 GGHQ92820 318 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 FAM46BQ96A09 425 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 OR5B12Q96R08 314 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 NABP2Q9BQ15 211 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 UQCC2Q9BRT2 126 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 CST11Q9H112 138 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 GNB4Q9HAV0 340 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 TRAV41A0A0B4J266 112 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 I3L521 148 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 NBR2O15453 112 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 LY86O95711 162 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 CELP19835 753 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 CNTFRP26992 372 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 MAPK3P27361 379 aaPredicted RBP11.23□□□□□ -0.61
PAF1-202ENST00000416728 RUNX1Q01196 453 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 LRRC36Q1X8D7 754 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 OR2AK2Q8NG84 335 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 GALMQ96C23 342 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 CYYR1Q96J86 154 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 RITA1Q96K30 269 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 NEDD4LQ96PU5 975 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 ASCL2Q99929 193 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 ANKRD60Q9BZ19 345 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 KIAA1456Q9P272 454 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 GHRLQ9UBU3 117 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 LRRC42Q9Y546 428 aa11.23□□□□□ -0.61
PAF1-202ENST00000416728 SAA2-SAA4A0A096LPE2 208 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 IGHV7-81A0A0B4J1V7 117 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 EFCAB10A6NFE3 127 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 MYL12BO14950 172 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 YPEL1O60688 119 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 IGLV1-40P01703 118 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 SAA2P0DJI9 122 aaPredicted RBP11.22□□□□□ -0.61
PAF1-202ENST00000416728 BLVRBP30043 206 aaPredicted RBP11.22□□□□□ -0.61
PAF1-202ENST00000416728 GNB1P62873 340 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 KIAA0141Q14154 515 aaPredicted RBP11.22□□□□□ -0.61
PAF1-202ENST00000416728 C5orf64Q2M2E5 130 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 LIN54Q6MZP7 749 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 ZNF833PQ6ZTB9 187 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 C5orf24Q7Z6I8 188 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 DHRSXQ8N5I4 330 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 YPEL2Q96QA6 119 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 CNOT2Q9NZN8 540 aaKnown RBP11.22□□□□□ -0.61
PAF1-202ENST00000416728 ABRACLQ9P1F3 81 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 SMAD5-AS1Q9Y6J3 95 aa11.22□□□□□ -0.61
PAF1-202ENST00000416728 CD1AP06126 327 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 UBBP0CG47 229 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 CHATP28329 748 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 OR3A3P47888 321 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 RAB9AP51151 201 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 WNT4P56705 351 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 LY6G6FQ5SQ64 297 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 C6orf141Q5SZD1 244 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 FAM27D1Q5T7N8 215 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 NPBQ8NG41 125 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 ISYNA1Q9NPH2 558 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 C8orf4Q9NR00 106 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 STEAP1Q9UHE8 339 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 ERGIC3Q9Y282 383 aa11.21□□□□□ -0.61
PAF1-202ENST00000416728 RYR3Q15413 4870 aa11.21□□□□□ -0.62
PAF1-202ENST00000416728 OVOL1O14753 267 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 NDUFA3O95167 84 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 HMGN3Q15651 99 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 AHSA2Q719I0 299 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 ZNF429Q86V71 674 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 PACRGLQ8N7B6 248 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 MINDY2Q8NBR6 621 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 IL1F10Q8WWZ1 152 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 DCUN1D4Q92564 292 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 SULT4A1Q9BR01 284 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 IFI27L2Q9H2X8 130 aa11.2□□□□□ -0.62
PAF1-202ENST00000416728 C3orf84H3BNL1 204 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 EBAG9O00559 213 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 ST8SIA5O15466 376 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 OR10K2Q6IF99 312 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 FAM71F2Q6NXP2 309 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 FAM131AQ6UXB0 335 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 C6orf201Q7Z4U5 140 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 C8orf59Q8N0T1 100 aaPredicted RBP11.19□□□□□ -0.62
PAF1-202ENST00000416728 FAAP24Q9BTP7 215 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 TMEM59Q9BXS4 323 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 CHMP1AQ9HD42 196 aaPredicted RBP11.19□□□□□ -0.62
PAF1-202ENST00000416728 PIPOXQ9P0Z9 390 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 PSORS1C1Q9UIG5 152 aa11.19□□□□□ -0.62
PAF1-202ENST00000416728 FOXA2Q9Y261 457 aaPredicted RBP11.19□□□□□ -0.62
PAF1-202ENST00000416728 A0A1W2PN81 502 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 RAB29O14966 203 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 SAP30O75446 220 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 CHRNA7P36544 502 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 RPS27AP62979 156 aaKnown RBP11.18□□□□□ -0.62
PAF1-202ENST00000416728 NDPQ00604 133 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 PLGLAQ15195 96 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 ACSM3Q53FZ2 586 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 GLT8D1Q68CQ7 371 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 ZNF660Q6AZW8 331 aaPredicted RBP11.18□□□□□ -0.62
PAF1-202ENST00000416728 SVOPQ8N4V2 548 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 TCTEX1D1Q8N7M0 179 aa11.18□□□□□ -0.62
PAF1-202ENST00000416728 NANOGP1Q8N7R0 232 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms