RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CASTOR1Q8WTX7 329 aa11.77□□□□□ -0.53
HMGA1P1-201ENST00000415560 MITD1Q8WV92 249 aa11.77□□□□□ -0.53
HMGA1P1-201ENST00000415560 TMEM230Q96A57 120 aa11.77□□□□□ -0.53
HMGA1P1-201ENST00000415560 DMRTB1Q96MA1 342 aa11.77□□□□□ -0.53
HMGA1P1-201ENST00000415560 SSBP3Q9BWW4 388 aaPredicted RBP11.77□□□□□ -0.53
HMGA1P1-201ENST00000415560 SUCNR1Q9BXA5 334 aa11.77□□□□□ -0.53
HMGA1P1-201ENST00000415560 GSX2Q9BZM3 304 aa11.77□□□□□ -0.53
HMGA1P1-201ENST00000415560 NAA60Q9H7X0 242 aa11.77□□□□□ -0.53
HMGA1P1-201ENST00000415560 ZNF221Q9UK13 617 aa11.77□□□□□ -0.53
HMGA1P1-201ENST00000415560 DOCK11Q5JSL3 2073 aa11.77□□□□□ -0.53
HMGA1P1-201ENST00000415560 YLPM1P49750 1951 aaKnown RBP11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 UBR5O95071 2799 aaPredicted RBP11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 LOC105371242A0A075B767 164 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 IGKV1D-13A0A0B4J2D9 117 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 LIPFP07098 398 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 IGKV1-13P0DP09 117 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 OMGP23515 440 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 LOXL3P58215 753 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 ZNF273Q14593 569 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 FCN2Q15485 313 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 SLC9A3R2Q15599 337 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 ZNF818PQ6ZRF7 136 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 GALNT14Q96FL9 552 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 NEURL2Q9BR09 285 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 NARFLQ9H6Q4 476 aa11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 BEX4Q9NWD9 120 aaPredicted RBP11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 RPUSD1Q9UJJ7 312 aaKnown RBP11.76□□□□□ -0.53
HMGA1P1-201ENST00000415560 ADGRG4Q8IZF6 3080 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 C3orf85A0A1B0GTC6 90 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 FCN3O75636 299 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 RBP4P02753 201 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 SULT1A3P0DMM9 295 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 SULT1A4P0DMN0 295 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 GPR12P47775 334 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 SRPXP78539 464 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 GNMTQ14749 295 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 TCF23Q7RTU1 214 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 TBC1D26Q86UD7 250 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 C10orf105Q8TEF2 133 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 PERPQ96FX8 193 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 BPESC1Q9GZL8 116 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 OR2D2Q9H210 308 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 MGAT4CQ9UBM8 478 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 RNF150Q9ULK6 438 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 PSG11Q9UQ72 335 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 GAB2Q9UQC2 676 aa11.75□□□□□ -0.53
HMGA1P1-201ENST00000415560 RELNP78509 3460 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 C17orf98A8MV24 154 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 PGLYRP1O75594 196 aaPredicted RBP11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 IGHV2-5P01817 119 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 CCL3L1P16619 93 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 SUPT4H1P63272 117 aaKnown RBP11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 CATR1Q13166 79 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 PRAMEF5Q5TYX0 476 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 LDLRAD3Q86YD5 345 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 LGI3Q8N145 548 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 LY6G5BQ8NDX9 201 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 ASB13Q8WXK3 278 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 PIPOXQ9P0Z9 390 aa11.74□□□□□ -0.53
HMGA1P1-201ENST00000415560 PHF1O43189 567 aaPredicted RBP11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 FOXH1O75593 365 aa11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 IFNA21P01568 189 aa11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 HNRNPCP07910 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 CD83Q01151 205 aa11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 ZNF66Q6ZN08 573 aa11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 LRRC75A-AS1Q8N1F1 130 aa11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 DRAM1Q8N682 238 aa11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 TCTEX1D1Q8N7M0 179 aa11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 CLDND2Q8NHS1 167 aa11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 ABHD14AQ9BUJ0 271 aa11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 METTL8Q9H825 291 aaKnown RBP11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 SESN1Q9Y6P5 492 aa11.73□□□□□ -0.53
HMGA1P1-201ENST00000415560 M0R1W7 72 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 GOSR2O14653 212 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 TOR1AO14656 332 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 RAB29O14966 203 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 ST8SIA5O15466 376 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 ENSAO43768 121 aaKnown RBP11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 OR5AC1P0C628 307 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 IGHV1-8P0DP01 117 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 SLC25A16P16260 332 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 HLA-GP17693 338 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 F2RP25116 425 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 PRRX1P54821 245 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 DLX6P56179 175 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 ERVFRD-1P60508 538 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 TMEM187Q14656 261 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 GSG1LQ6UXU4 331 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 LIAT1Q6ZQX7 453 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 C1orf122Q6ZSJ8 110 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 ZNF695Q8IW36 515 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 C8orf31Q8N9H6 132 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 S1PR3Q99500 378 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 HSD17B10Q99714 261 aaKnown RBP11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 AGMATQ9BSE5 352 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 ZNF436Q9C0F3 470 aaPredicted RBP11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 PARP12Q9H0J9 701 aaKnown RBP11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 RAB18Q9NP72 206 aa11.72□□□□□ -0.53
HMGA1P1-201ENST00000415560 LIN7CQ9NUP9 197 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms