RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 SLC23A1Q9UHI7 598 aa11.81□□□□□ -0.52
LIMS1-206ENST00000414829 DSCAML1Q8TD84 2053 aa11.81□□□□□ -0.52
LIMS1-206ENST00000414829 M0QZK8 103 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 IGHV3-7P01780 117 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 CTXN2P0C2S0 81 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 PPP1CCP36873 323 aaKnown RBP11.8□□□□□ -0.52
LIMS1-206ENST00000414829 TGFBR1P36897 503 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 CBX5P45973 191 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 LDLRAD2Q5SZI1 272 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 THNSL2Q86YJ6 484 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 CLVS1Q8IUQ0 354 aaPredicted RBP11.8□□□□□ -0.52
LIMS1-206ENST00000414829 ZNF439Q8NDP4 499 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 CABLES2Q9BTV7 478 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 PIPOXQ9P0Z9 390 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 MMP24Q9Y5R2 645 aa11.8□□□□□ -0.52
LIMS1-206ENST00000414829 SMIM31A0A1B0GVY4 71 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 A6NDX4 124 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 TMEM235A6NFC5 223 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 XRCC3O43542 346 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 LANCL1O43813 399 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 APOA1P02647 267 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 ZNF182P17025 639 aaPredicted RBP11.79□□□□□ -0.52
LIMS1-206ENST00000414829 LY6EQ16553 131 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 ZNF260Q3ZCT1 412 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 AWAT1Q58HT5 328 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 TMEM69Q5SWH9 247 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 OLFML2AQ68BL7 652 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 TGIF2LXQ8IUE1 241 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 DYNAPQ8N1N2 210 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 OR52L2PQ8NGH6 319 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 OR5H6Q8NGV6 325 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 OR10J5Q8NHC4 309 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 C1RLQ9NZP8 487 aa11.79□□□□□ -0.52
LIMS1-206ENST00000414829 TRAV18A0A075B6X5 111 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 A0A1W2PPI3 338 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 TIMM23O14925 209 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 RAB29O14966 203 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 TSPAN9O75954 239 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 GNMTQ14749 295 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 CT45A1Q5HYN5 189 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 IZUMO1Q8IYV9 350 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 LYG1Q8N1E2 194 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 CT45A3Q8NHU0 189 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 PIFOQ8TCI5 191 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 RTN4IP1Q8WWV3 396 aaPredicted RBP11.78□□□□□ -0.52
LIMS1-206ENST00000414829 S1PR3Q99500 378 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 GINS4Q9BRT9 223 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 NAA50Q9GZZ1 169 aaKnown RBP11.78□□□□□ -0.52
LIMS1-206ENST00000414829 C16orf95Q9H693 158 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 ADAM30Q9UKF2 790 aa11.78□□□□□ -0.52
LIMS1-206ENST00000414829 IGHV1-3A0A0C4DH29 117 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 A0A1W2PPE3 182 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 OR2F2O95006 317 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 SCTP09683 121 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 CEACAM6P40199 344 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 HABP2Q14520 560 aaPredicted RBP11.77□□□□□ -0.53
LIMS1-206ENST00000414829 Q6ZPA2 131 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 C3orf56Q8N813 242 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 OR56B4Q8NH76 319 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 OR2T6Q8NHC8 308 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 C15orf40Q8WUR7 153 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 ST6GALNAC6Q969X2 333 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 CCDC59Q9P031 241 aaKnown RBP11.77□□□□□ -0.53
LIMS1-206ENST00000414829 COMMD3Q9UBI1 195 aa11.77□□□□□ -0.53
LIMS1-206ENST00000414829 COL6A5A8TX70 2615 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 FBN1P35555 2871 aaKnown RBP11.76□□□□□ -0.53
LIMS1-206ENST00000414829 CLPSL1A2RUU4 121 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 BET1O15155 118 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 SLC31A2O15432 143 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 TPPPO94811 219 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 PAX6P26367 422 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 CD1BP29016 333 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 HES1Q14469 280 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 UTF1Q5T230 341 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 MOB3BQ86TA1 216 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 DRAM1Q8N682 238 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.76□□□□□ -0.53
LIMS1-206ENST00000414829 OR8H1Q8NGG4 311 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 NUDCD2Q8WVJ2 157 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 RBM14Q96PK6 669 aaKnown RBP11.76□□□□□ -0.53
LIMS1-206ENST00000414829 ST6GALNAC5Q9BVH7 336 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 PRSS22Q9GZN4 317 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 TOLLIPQ9H0E2 274 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 IFI27L2Q9H2X8 130 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 AUNIPQ9H7T9 357 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 ZNF221Q9UK13 617 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 MOB4Q9Y3A3 225 aa11.76□□□□□ -0.53
LIMS1-206ENST00000414829 KIAA2026Q5HYC2 2103 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 TRBV6-7A0A0A0MS04 114 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 FAM90A9PA6NNJ1 464 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 TMEM11P17152 192 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 RAB13P51153 203 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 ZNF134P52741 427 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 ARPC4P59998 168 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 CNIH2Q6PI25 160 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 ZNF833PQ6ZTB9 187 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 OR2T10Q8NGZ9 312 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 CFHR4Q92496 578 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 ISOC1Q96CN7 298 aa11.75□□□□□ -0.53
LIMS1-206ENST00000414829 SLC25A33Q9BSK2 321 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms