RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 IDI2-AS1Q9NZ38 188 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 OPTCQ9UBM4 332 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 TIMM22Q9Y584 194 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 PLCH2O75038 1416 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 YLPM1P49750 1951 aaKnown RBP3.06□□□□□ -1.92
BRCA1-204ENST00000412061 CROCCQ5TZA2 2017 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 LTBP1Q14766 1721 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 IGHV3-49A0A0A0MS15 119 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 TRAV8-1A0A0A6YYK1 113 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 MRASO14807 208 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 STK16O75716 305 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 OR7C1O76099 320 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-204ENST00000412061 CXorf1O96002 111 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 IFNA14P01570 189 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 HLA-DQA1P01909 254 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 HSPA9P38646 679 aaKnown RBP3.05□□□□□ -1.92
BRCA1-204ENST00000412061 RPL5P46777 297 aaKnown RBP3.05□□□□□ -1.92
BRCA1-204ENST00000412061 RPS10P46783 165 aaKnown RBP3.05□□□□□ -1.92
BRCA1-204ENST00000412061 BTN3A2P78410 334 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 TNFRSF9Q07011 255 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 LOXL1Q08397 574 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-204ENST00000412061 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 PYCR3Q53H96 274 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 FAM201AQ5SY85 155 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 C1orf194Q5T5A4 169 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 MRPL2Q5T653 305 aaKnown RBP3.05□□□□□ -1.92
BRCA1-204ENST00000412061 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 MORN3Q6PF18 240 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-204ENST00000412061 NTM-AS1Q6ZSK4 140 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 DEFB125Q8N687 156 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 OR4X1Q8NH49 305 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 OR51H1Q8NH63 302 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 GALMQ96C23 342 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 REEP6Q96HR9 211 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 LINC00477Q96M19 166 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 OR52E6Q96RD3 313 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 THTPAQ9BU02 230 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 TAS2R1Q9NYW7 299 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 SMPXQ9UHP9 88 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 ZNF222Q9UK12 451 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 WASHC3Q9Y3C0 194 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 PCYT1BQ9Y5K3 369 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-204ENST00000412061 PIK3C2GO75747 1445 aa3.05□□□□□ -1.92
BRCA1-204ENST00000412061 OR4C46A6NHA9 309 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 BHLHE40O14503 412 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 IGKV3-15P01624 115 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 FAM228BP0C875 321 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 KLK2P20151 261 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 HERVK_113P63121 156 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 HES3Q5TGS1 186 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 CYHR1Q6ZMK1 362 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 TMEM144Q7Z5S9 345 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 DPPA2Q7Z7J5 298 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 MCFD2Q8NI22 146 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 C2orf15Q8WU43 125 aaKnown RBP3.04□□□□□ -1.92
BRCA1-204ENST00000412061 SLC25A44Q96H78 314 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-204ENST00000412061 FAM210BQ96KR6 192 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 OR2V2Q96R30 315 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 MARVELD1Q9BSK0 173 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 MS4A8Q9BY19 250 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 ULBP3Q9BZM4 244 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 GTSF1LQ9H1H1 148 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 ZNF430Q9H8G1 570 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-204ENST00000412061 BATF3Q9NR55 127 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 TP53TG3Q9ULZ0 132 aa3.04□□□□□ -1.92
BRCA1-204ENST00000412061 WRNQ14191 1432 aaPredicted RBP eCLIP3.04□□□□□ -1.92
BRCA1-204ENST00000412061 TDRD6O60522 2096 aaKnown RBP3.04□□□□□ -1.92
BRCA1-204ENST00000412061 ZNF646O15015 1829 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-204ENST00000412061 NOTCH3Q9UM47 2321 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 DHX57Q6P158 1386 aaKnown RBP3.03□□□□□ -1.92
BRCA1-204ENST00000412061 BAZ2AQ9UIF9 1905 aaKnown RBP3.03□□□□□ -1.92
BRCA1-204ENST00000412061 ARAP3Q8WWN8 1544 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 A8MWL6 223 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 C4orf51C9J302 202 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 ATG12O94817 140 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 IFNA1P01562 189 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 IFNA21P01568 189 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 HLA-DQB1P01920 261 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 TTRP02766 147 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 CYBAP13498 195 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 CCL1P22362 96 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 NUDT2P50583 147 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 SYCNQ0VAF6 134 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 LPCAT3Q6P1A2 487 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 C3orf33Q6P1S2 294 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 EBLN2Q6P2I7 272 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 SBSNQ6UWP8 590 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 LINC01551Q86U37 167 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 SMIM20Q8N5G0 67 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 BORCS7Q96B45 105 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 RBMXL1Q96E39 390 aaKnown RBP3.03□□□□□ -1.92
BRCA1-204ENST00000412061 CHCHD7Q9BUK0 85 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 MED28Q9H204 178 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 TMEM38BQ9NVV0 291 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 CMTM6Q9NX76 183 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 DNAJC12Q9UKB3 198 aa3.03□□□□□ -1.92
BRCA1-204ENST00000412061 PXMP4Q9Y6I8 212 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms