RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 CD3GP09693 182 aa16.59■□□□□ 0.25
VSX1-204ENST00000409958 SNRPBP14678 240 aaKnown RBP16.59■□□□□ 0.25
VSX1-204ENST00000409958 HIST1H1DP16402 221 aaKnown RBP16.59■□□□□ 0.25
VSX1-204ENST00000409958 REG1BP48304 166 aa16.59■□□□□ 0.25
VSX1-204ENST00000409958 SCAND1P57086 179 aa16.59■□□□□ 0.25
VSX1-204ENST00000409958 MRPS15P82914 257 aaKnown RBP16.59■□□□□ 0.25
VSX1-204ENST00000409958 ARL6IP1Q15041 203 aa16.59■□□□□ 0.25
VSX1-204ENST00000409958 MOB3BQ86TA1 216 aa16.59■□□□□ 0.25
VSX1-204ENST00000409958 SERPINE3A8MV23 424 aa16.58■□□□□ 0.24
VSX1-204ENST00000409958 M0QZK8 103 aa16.58■□□□□ 0.24
VSX1-204ENST00000409958 TMEM127O75204 238 aa16.58■□□□□ 0.24
VSX1-204ENST00000409958 GNB3P16520 340 aa16.58■□□□□ 0.24
VSX1-204ENST00000409958 LYG1Q8N1E2 194 aa16.58■□□□□ 0.24
VSX1-204ENST00000409958 LGALS14Q8TCE9 139 aa16.58■□□□□ 0.24
VSX1-204ENST00000409958 LANCL1O43813 399 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 SCGNO76038 276 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 EBI3Q14213 229 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 HES1Q14469 280 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 TGIF2LXQ8IUE1 241 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 IZUMO1Q8IYV9 350 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 OR2AK2Q8NG84 335 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 SERTAD4Q9NUC0 356 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 MOB4Q9Y3A3 225 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 ETV7Q9Y603 341 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 TRRAPQ9Y4A5 3859 aa16.57■□□□□ 0.24
VSX1-204ENST00000409958 A0A075B6Q4 140 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 TRDCB7Z8K6 153 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 IGKV1D-33P01593 117 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 IGKV1-33P01594 117 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 FCGR3AP08637 254 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 SCTP09683 121 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 SMIM18P0DKX4 95 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 TMEM11P17152 192 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 CD1BP29016 333 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 IDNKQ5T6J7 187 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 Q6ZS46 218 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 ODF3L1Q8IXM7 274 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 KLHDC1Q8N7A1 406 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.56■□□□□ 0.24
VSX1-204ENST00000409958 SLC23A1Q9UHI7 598 aa16.56■□□□□ 0.24
VSX1-204ENST00000409958 IGHV3-72A0A0B4J1Y9 119 aa16.55■□□□□ 0.24
VSX1-204ENST00000409958 ITGB1BP1O14713 200 aa16.55■□□□□ 0.24
VSX1-204ENST00000409958 AMY1AP04745 511 aa16.55■□□□□ 0.24
VSX1-204ENST00000409958 AMY2AP04746 511 aa16.55■□□□□ 0.24
VSX1-204ENST00000409958 ZBTB25P24278 435 aa16.55■□□□□ 0.24
VSX1-204ENST00000409958 TGFBR1P36897 503 aa16.55■□□□□ 0.24
VSX1-204ENST00000409958 PRR31Q5SQ13 230 aa16.55■□□□□ 0.24
VSX1-204ENST00000409958 CROCCP3Q8IVE0 287 aa16.55■□□□□ 0.24
VSX1-204ENST00000409958 OR13F1Q8NGS4 319 aa16.55■□□□□ 0.24
VSX1-204ENST00000409958 RHBDL2Q9NX52 303 aa16.55■□□□□ 0.24
VSX1-204ENST00000409958 HSPA12AO43301 675 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 VDAC2P45880 294 aaPredicted RBP16.54■□□□□ 0.24
VSX1-204ENST00000409958 LSM3P62310 102 aaKnown RBP16.54■□□□□ 0.24
VSX1-204ENST00000409958 ARFRP1Q13795 201 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 HNF4GQ14541 408 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 KIR2DS1Q14954 304 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 HERPUD1Q15011 391 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 CDNFQ49AH0 187 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 ABCA11PQ4W5N1 156 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 ARSJQ5FYB0 599 aaPredicted RBP16.54■□□□□ 0.24
VSX1-204ENST00000409958 OR4A4PQ8NGN8 299 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 OR2T10Q8NGZ9 312 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 EAF1Q96JC9 268 aaPredicted RBP16.54■□□□□ 0.24
VSX1-204ENST00000409958 FUNDC2Q9BWH2 189 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 IFI27L2Q9H2X8 130 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 OR1A1Q9P1Q5 309 aa16.54■□□□□ 0.24
VSX1-204ENST00000409958 IGKV1-6A0A0C4DH72 117 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 FABP7O15540 132 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 FGF16O43320 207 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 VSIG10L2P0DP72 767 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 TALDO1P37837 337 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 RPS19P39019 145 aaKnown RBP16.53■□□□□ 0.24
VSX1-204ENST00000409958 CEACAM6P40199 344 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 SRSF7Q16629 238 aaKnown RBP eCLIP16.53■□□□□ 0.24
VSX1-204ENST00000409958 FAM71F2Q6NXP2 309 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 ZNF833PQ6ZTB9 187 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 OR5H6Q8NGV6 325 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 EDARADDQ8WWZ3 215 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 WNT10AQ9GZT5 417 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 GHITMQ9H3K2 345 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 PIPOXQ9P0Z9 390 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 MGAM2Q2M2H8 2515 aa16.53■□□□□ 0.24
VSX1-204ENST00000409958 SAA2-SAA4A0A096LPE2 208 aa16.52■□□□□ 0.24
VSX1-204ENST00000409958 RAB29O14966 203 aa16.52■□□□□ 0.24
VSX1-204ENST00000409958 ST8SIA5O15466 376 aa16.52■□□□□ 0.24
VSX1-204ENST00000409958 DIRAS3O95661 229 aa16.52■□□□□ 0.24
VSX1-204ENST00000409958 GSTP1P09211 210 aaKnown RBP16.52■□□□□ 0.24
VSX1-204ENST00000409958 SAA2P0DJI9 122 aaPredicted RBP16.52■□□□□ 0.24
VSX1-204ENST00000409958 SERPINB10P48595 397 aa16.52■□□□□ 0.24
VSX1-204ENST00000409958 HACD4Q5VWC8 232 aa16.52■□□□□ 0.24
VSX1-204ENST00000409958 Q6ZS49 121 aa16.52■□□□□ 0.24
VSX1-204ENST00000409958 Q8N6K4 173 aa16.52■□□□□ 0.24
VSX1-204ENST00000409958 SLC25A38Q96DW6 304 aa16.52■□□□□ 0.24
VSX1-204ENST00000409958 PARP12Q9H0J9 701 aaKnown RBP16.52■□□□□ 0.24
VSX1-204ENST00000409958 ELF5Q9UKW6 265 aaPredicted RBP16.52■□□□□ 0.24
VSX1-204ENST00000409958 SPATA2Q9UM82 520 aa16.52■□□□□ 0.24
VSX1-204ENST00000409958 ZNF736B4DX44 427 aaPredicted RBP16.51■□□□□ 0.23
VSX1-204ENST00000409958 PEX14O75381 377 aa16.51■□□□□ 0.23
VSX1-204ENST00000409958 MOSP00540 346 aa16.51■□□□□ 0.23
VSX1-204ENST00000409958 DTYMKP23919 212 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms