RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 RAB11BQ15907 218 aa15.49■□□□□ 0.07
TSPAN4-209ENST00000409543 KHDC1LQ5JSQ8 128 aa15.49■□□□□ 0.07
TSPAN4-209ENST00000409543 ZNF880Q6PDB4 577 aa15.49■□□□□ 0.07
TSPAN4-209ENST00000409543 ZNF367Q7RTV3 350 aa15.49■□□□□ 0.07
TSPAN4-209ENST00000409543 SVOPQ8N4V2 548 aa15.49■□□□□ 0.07
TSPAN4-209ENST00000409543 S1PR3Q99500 378 aa15.49■□□□□ 0.07
TSPAN4-209ENST00000409543 RIMS4Q9H426 269 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-209ENST00000409543 LINC01548A6NM66 108 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 SOCS1O15524 211 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 CD33P20138 364 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 RANBP1P43487 201 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 GPR12P47775 334 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 PSMD7P51665 324 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 SLC35B1P78383 322 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 ODF3L1Q8IXM7 274 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 STPG2Q8N412 459 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 COMMD1Q8N668 190 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 CHMP1AQ9HD42 196 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 LINC00527Q9UJ94 153 aa15.48■□□□□ 0.07
TSPAN4-209ENST00000409543 TRBV6-6A0A0A6YYG2 114 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 AP4M1O00189 453 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 PF4P02776 101 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 LSAMPQ13449 338 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 Q6ZPA2 131 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 MOB1BQ7L9L4 216 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 OR51D1Q8NGF3 324 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 IL1F10Q8WWZ1 152 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 RASL11BQ9BPW5 248 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 STEAP1Q9UHE8 339 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 HSF4Q9ULV5 492 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 V9GY05 133 aa15.47■□□□□ 0.07
TSPAN4-209ENST00000409543 FOXI3A8MTJ6 420 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 ATP6V1G2O95670 118 aa15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 F2RL1P55085 397 aa15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 RPL23AP62750 156 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 SSX1Q16384 188 aa15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 ZNF833PQ6ZTB9 187 aa15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 REC114Q7Z4M0 266 aa15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 FAM71E2Q8N5Q1 922 aa15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 OR2AK2Q8NG84 335 aa15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 FAM3DQ96BQ1 224 aa15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 ZFP57Q9NU63 452 aa15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 AK3Q9UIJ7 227 aa15.46■□□□□ 0.07
TSPAN4-209ENST00000409543 TMEM50BP56557 158 aa15.45■□□□□ 0.06
TSPAN4-209ENST00000409543 CLDN12P56749 244 aa15.45■□□□□ 0.06
TSPAN4-209ENST00000409543 C2orf76Q3KRA6 126 aa15.45■□□□□ 0.06
TSPAN4-209ENST00000409543 SETD6Q8TBK2 473 aa15.45■□□□□ 0.06
TSPAN4-209ENST00000409543 PHF21AQ96BD5 680 aa15.45■□□□□ 0.06
TSPAN4-209ENST00000409543 NABP2Q9BQ15 211 aa15.45■□□□□ 0.06
TSPAN4-209ENST00000409543 GON7Q9BXV9 100 aa15.45■□□□□ 0.06
TSPAN4-209ENST00000409543 MRPL20Q9BYC9 149 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-209ENST00000409543 MRPS14O60783 128 aaKnown RBP15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 IGLL1P15814 213 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 SLC6A1P30531 599 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 OR3A3P47888 321 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 VEGFCP49767 419 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 GABARAPL2P60520 117 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 TEX38Q6PEX7 206 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 CD200R1LQ6Q8B3 271 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 OR56B1Q8NGI3 324 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 RBMXL1Q96E39 390 aaKnown RBP15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 IFI27L2Q9H2X8 130 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 NECAP2Q9NVZ3 263 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 NDUFB11Q9NX14 153 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 MGAT4AQ9UM21 535 aa15.44■□□□□ 0.06
TSPAN4-209ENST00000409543 SAA2-SAA4A0A096LPE2 208 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 TRAV1-2A0A0B4J238 106 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 PDCD5O14737 125 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 LDLRAD4O15165 306 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 PRB2P02812 416 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 SAA2P0DJI9 122 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 SOX6P35712 828 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 PNLIPRP3Q17RR3 467 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 FAM71F2Q6NXP2 309 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 RCC1LQ96I51 464 aaKnown RBP15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 ARHGAP5-AS1Q96IT6 56 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 HSPB9Q9BQS6 159 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 HDHD3Q9BSH5 251 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 C12orf4Q9NQ89 552 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 PIPOXQ9P0Z9 390 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 SLC23A1Q9UHI7 598 aa15.43■□□□□ 0.06
TSPAN4-209ENST00000409543 ITGB1BP1O14713 200 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 DENRO43583 198 aaKnown RBP15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 RRP9O43818 475 aaKnown RBP15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 DUS4LO95620 317 aaKnown RBP15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 GALP22466 123 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 ACTBP60709 375 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 HLA-DRB3P79483 266 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 MMDQ15546 238 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 HES5Q5TA89 166 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 LINC00482Q8N8I6 264 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 PECRQ9BY49 303 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 GHITMQ9H3K2 345 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 Q9N2K0 584 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 ZNF580Q9UK33 172 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 RAB22AQ9UL26 194 aa15.42■□□□□ 0.06
TSPAN4-209ENST00000409543 TMEM272A0A1B0GTI8 110 aa15.41■□□□□ 0.06
TSPAN4-209ENST00000409543 TRDV1A0A1B0GX56 115 aa15.41■□□□□ 0.06
TSPAN4-209ENST00000409543 RAB29O14966 203 aa15.41■□□□□ 0.06
TSPAN4-209ENST00000409543 ST8SIA5O15466 376 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms