RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SRSF10O75494 262 aaKnown RBP12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 ARF6P62330 175 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 FADS6Q8N9I5 356 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 PRO1933Q9H354 126 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 ELOVL5Q9NYP7 299 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 TTRP02766 147 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 MELTFP08582 738 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 C10orf35Q96D05 121 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 OR10C1Q96KK4 312 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 METTL1Q9UBP6 276 aaKnown RBP12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 MSRB2Q9Y3D2 182 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 ADAM11O75078 769 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 DAOP14920 347 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 CEBPDP49716 269 aaPredicted RBP12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 IQCJQ1A5X6 159 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 CLLU1Q5K131 121 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 ZNF826PQ6ZT77 177 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 CYB5R1Q9UHQ9 305 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 IGSF23A1L1A6 192 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 OR1L8Q8NGR8 309 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 KCNK17Q96T54 332 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 KLHDC2Q9Y2U9 406 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 C5orf52A6NGY3 159 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 K7N7A8 449 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 HIST1H1EP10412 219 aaKnown RBP12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 RNF212Q495C1 297 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 OR2D3Q8NGH3 330 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 GSX1Q9H4S2 264 aaPredicted RBP12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 DUXBA0A1W2PPF3 345 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 PAGE4O60829 102 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 TMEM50BP56557 158 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 UNQ5815/PRO19632Q6UWF5 114 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 SEC11CQ9BY50 192 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 RCC2Q9P258 522 aaKnown RBP12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 NAT8Q9UHE5 227 aa12.32□□□□□ -0.44
PCDHA11-201ENST00000398640 IGF2P01344 180 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 EFNB2P52799 333 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 SNRPEP62304 92 aaKnown RBP12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 PSG4Q00888 419 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 ZFP36L1Q07352 338 aaKnown RBP12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 BVESQ8NE79 360 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 SNRNP40Q96DI7 357 aaKnown RBP12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 SCN3AQ9NY46 2000 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 LOC389332A0A1B0GUA5 103 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 PPOXP50336 477 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 B2MP61769 119 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 LRRC75AQ8NAA5 344 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 PGLYRP3Q96LB9 341 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 GAPDHP04406 335 aaKnown RBP12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 DCAF12L2Q5VW00 463 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 ZNF880Q6PDB4 577 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 Q6ZN92 141 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 OR10G8Q8NGN5 311 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 IGKV3D-11A0A0A0MRZ8 115 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 IGKV3-11P04433 115 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 KHDC3LQ587J8 217 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 SLC25A53Q5H9E4 307 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 SPANXN1Q5VSR9 72 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 WDR73Q6P4I2 378 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 RNF133Q8WVZ7 376 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 ABHD14BQ96IU4 210 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 CHST5Q9GZS9 411 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 NTN3O00634 580 aaPredicted RBP12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 VSIG8P0DPA2 414 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 TM4SF20Q53R12 229 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 TMEM255AQ5JRV8 349 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 ZMAT5Q9UDW3 170 aaKnown RBP12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 HIGD1AQ9Y241 93 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 CEP290O15078 2479 aa12.31□□□□□ -0.44
PCDHA11-201ENST00000398640 PRSS23O95084 383 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 RIGQ13278 110 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 OVCH2Q7RTZ1 564 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 C1orf174Q8IYL3 243 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 FAM57AQ8TBR7 257 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 C16orf92Q96LL3 132 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 OR4C12Q96R67 309 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 LOC105371242A0A075B767 164 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 A0A1W2PRX2 142 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 TMEM229AB2RXF0 380 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 UBE2L6O14933 153 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 EWSR1Q01844 656 aaKnown RBP eCLIP12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 BSXQ3C1V8 233 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 OR8A1Q8NGG7 326 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 ZNF519Q8TB69 540 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 BRWD1Q9NSI6 2320 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 SLC25A42Q86VD7 318 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 LDLRAD3Q86YD5 345 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 MFSD2BA6NFX1 497 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 HCP5Q6MZN7 132 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 TEPPQ6URK8 271 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 PPIAL4CA0A0B4J2A2 164 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 HELTA6NFD8 242 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 RAB29O14966 203 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 PPIAL4GP0DN37 164 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 GABRA6Q16445 453 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 MUC15Q8N387 334 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 RTN4RQ9BZR6 473 aa12.3□□□□□ -0.44
PCDHA11-201ENST00000398640 V9GYH0 126 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms